RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 PTPN20Q4JDL3 420 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 KLHL10Q6JEL2 608 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 ZDHHC17Q8IUH5 632 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 OR6K2Q8NGY2 324 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 OSBPL1AQ9BXW6 950 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 ZYG11BQ9C0D3 744 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 SLC25A18Q9H1K4 315 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 LRRN3Q9H3W5 708 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 GDPD2Q9HCC8 539 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 GEMIN8Q9NWZ8 242 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 ANKMY1Q9P2S6 941 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 ZNF212Q9UDV6 495 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 HOOK1Q9UJC3 728 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 ZDHHC9Q9Y397 364 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 PRAMEF33A0A0G2JMD5 474 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 A0A1W2PQC6 194 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 BICDL2A1A5D9 508 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 KRIT1O00522 736 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 PRAMEF10O60809 474 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 UGT2B4P06133 528 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 CD44P16070 742 aaKnown RBP11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 ITIH1P19827 911 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 CD82P27701 267 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 ETFBP38117 255 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 PEX5P50542 639 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 GEMIN4P57678 1058 aaKnown RBP11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 RNASE9P60153 205 aaKnown RBP11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 POLD3Q15054 466 aaPredicted RBP11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 ARHGAP44Q17R89 818 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 GJB7Q6PEY0 223 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 VASH2Q86V25 355 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 GKN2Q86XP6 184 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 CCNJLQ8IV13 435 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 HID1Q8IV36 788 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 TP53I13Q8NBR0 393 aaPredicted RBP11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 OR2AP1Q8NGE2 309 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 CXorf40AQ8TE69 158 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 NT5C3BQ969T7 300 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 HAPLN3Q96S86 360 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 CMKLR1Q99788 373 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 EPAS1Q99814 870 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 EDEM3Q9BZQ6 932 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 MBNL1Q9NR56 388 aaKnown RBP11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 GPR34Q9UPC5 381 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 ACTL7AQ9Y615 435 aa11.96□□□□□ -0.49
GTF3C1-209ENST00000568569 NBASA2RRP1 2371 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 TMEM110-MUSTN1A8MSY1 372 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 MMP20O60882 483 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 RASGRP1O95267 797 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 POP4O95707 220 aaKnown RBP11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 CD160O95971 181 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 GSRP00390 522 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 HTR1BP28222 390 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 KRT9P35527 623 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 SNRPD1P62314 119 aaKnown RBP11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 CYP4F2P78329 520 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 PTK2Q05397 1052 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 ZFP36L1Q07352 338 aaKnown RBP11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 TCEA2Q15560 299 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 ALG11Q2TAA5 492 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 KLHL40Q2TBA0 621 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 SLC25A52Q3SY17 297 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 ARTNQ5T4W7 220 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 ISM2Q6H9L7 571 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 TRIM65Q6PJ69 517 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 TTC7BQ86TV6 843 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 DTX1Q86Y01 620 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 DRC7Q8IY82 874 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 NELFBQ8WX92 580 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 SHC3Q92529 594 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 ARHGEF2Q92974 986 aaKnown RBP11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 TSACCQ96A04 125 aaPredicted RBP11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 KLHL32Q96NJ5 620 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 TBCBQ99426 244 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 FUCA2Q9BTY2 467 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 TMPRSS4Q9NRS4 437 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 FOXJ2Q9P0K8 574 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 APEX2Q9UBZ4 518 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 NOTCH2Q04721 2471 aa11.95□□□□□ -0.5
GTF3C1-209ENST00000568569 GLB1P16278 677 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 WT1P19544 449 aaPredicted RBP11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 ACVRL1P37023 503 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 SCNN1AP37088 669 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 MORC3Q14149 939 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 UBAP2LQ14157 1087 aaKnown RBP11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 NFATC4Q14934 902 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 CLCA4Q14CN2 919 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 LRRC14Q15048 493 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 IRF4Q15306 451 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 MYLK3Q32MK0 819 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 LRRC73Q5JTD7 316 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 SMYD5Q6GMV2 418 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 GDPD4Q6W3E5 623 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 ZFAND4Q86XD8 727 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 GPR156Q8NFN8 814 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 ATL2Q8NHH9 583 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 HTR3CQ8WXA8 447 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 USP7Q93009 1102 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 VOPP1Q96AW1 172 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 CRACR2AQ9BSW2 395 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms