RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 PPP2R5EQ16537 467 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 IFI16Q16666 785 aaKnown RBP9.91□□□□□ -0.82
CLK3-220ENST00000567992 ZNF284Q2VY69 593 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 AASDHQ4L235 1098 aaPredicted RBP9.91□□□□□ -0.82
CLK3-220ENST00000567992 LRRC73Q5JTD7 316 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 SEL1L3Q68CR1 1132 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 TBC1D3GQ6DHY5 549 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 ALG1LQ6GMV1 187 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 TBC1D3CQ6IPX1 549 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 LAYNQ6UX15 382 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 RABEPKQ7Z6M1 372 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 RFX6Q8HWS3 928 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 CAMK1DQ8IU85 385 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 TBC1D3Q8IZP1 549 aaPredicted RBP9.91□□□□□ -0.82
CLK3-220ENST00000567992 C12orf50Q8NA57 414 aaPredicted RBP9.91□□□□□ -0.82
CLK3-220ENST00000567992 KIAA1524Q8TCG1 905 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 RMDN1Q96DB5 314 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 NUDCD1Q96RS6 583 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 TUBGCP5Q96RT8 1024 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 LGMNQ99538 433 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 EDEM2Q9BV94 578 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 MIR1-1HGQ9H1L0 117 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 SUV39H2Q9H5I1 410 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 TM9SF3Q9HD45 589 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 SLC6A14Q9UN76 642 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 HEY1Q9Y5J3 304 aa9.91□□□□□ -0.82
CLK3-220ENST00000567992 TRPM6Q9BX84 2022 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.9□□□□□ -0.82
CLK3-220ENST00000567992 A0A1W2PQU0 124 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 A0A1W2PR77 199 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 CCDC66A2RUB6 948 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 PRR5-ARHGAP8B1AHC4 643 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 ARHGAP33O14559 1287 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 MATN3O15232 486 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 DDX3YO15523 660 aaKnown RBP9.9□□□□□ -0.82
CLK3-220ENST00000567992 CST8O60676 142 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 ZRANB2O95218 330 aaKnown RBP eCLIP9.9□□□□□ -0.82
CLK3-220ENST00000567992 WNT1P04628 370 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 HLA-DQB2P05538 268 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 GNSP15586 552 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 TIMP2P16035 220 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 ZFXP17010 805 aaPredicted RBP9.9□□□□□ -0.82
CLK3-220ENST00000567992 MX2P20592 715 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 MAT2AP31153 395 aaKnown RBP9.9□□□□□ -0.82
CLK3-220ENST00000567992 PTPN7P35236 360 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 GRIA4P48058 902 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 SCNN1BP51168 640 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 RENBPP51606 427 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 AFF3P51826 1226 aaKnown RBP9.9□□□□□ -0.82
CLK3-220ENST00000567992 NAP1L1P55209 391 aaKnown RBP9.9□□□□□ -0.82
CLK3-220ENST00000567992 DYNLT1P63172 113 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 IFI35P80217 286 aaPredicted RBP9.9□□□□□ -0.82
CLK3-220ENST00000567992 ARHGAP8P85298 464 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 RAD51Q06609 339 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 TRAF2Q12933 501 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 GRIK2Q13002 908 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 ZBTB17Q13105 803 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 FGL2Q14314 439 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 GRM3Q14832 879 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 PRKD1Q15139 912 aaPredicted RBP9.9□□□□□ -0.82
CLK3-220ENST00000567992 RSPO4Q2I0M5 234 aaPredicted RBP9.9□□□□□ -0.82
CLK3-220ENST00000567992 TFDP3Q5H9I0 405 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 FAM182AQ5T1J6 154 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 STPG1Q5TH74 334 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 MARC1Q5VT66 337 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 TIGD7Q6NT04 549 aaPredicted RBP9.9□□□□□ -0.82
CLK3-220ENST00000567992 NEK5Q6P3R8 708 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 FBXL19Q6PCT2 694 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 ZNF662Q6ZS27 426 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 HORMAD1Q86X24 394 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 CCDC13Q8IYE1 715 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 RCOR2Q8IZ40 523 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 TXLNBQ8N3L3 684 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 RNF10Q8N5U6 811 aaKnown RBP9.9□□□□□ -0.82
CLK3-220ENST00000567992 TMEM145Q8NBT3 493 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 NETO1Q8TDF5 533 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.9□□□□□ -0.82
CLK3-220ENST00000567992 HCAR2Q8TDS4 363 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 SPOCK2Q92563 424 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 RAB7BQ96AH8 199 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 RBM41Q96IZ5 413 aaKnown RBP9.9□□□□□ -0.82
CLK3-220ENST00000567992 PDLIM2Q96JY6 352 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 ZNF641Q96N77 438 aaPredicted RBP9.9□□□□□ -0.82
CLK3-220ENST00000567992 IL12RB2Q99665 862 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 ATP13A3Q9H7F0 1226 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 NOD2Q9HC29 1040 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 NT5MQ9NPB1 228 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 DLL3Q9NYJ7 618 aa9.9□□□□□ -0.82
CLK3-220ENST00000567992 SAE1Q9UBE0 346 aaPredicted RBP9.9□□□□□ -0.82
CLK3-220ENST00000567992 TPX2Q9ULW0 747 aaKnown RBP9.9□□□□□ -0.82
CLK3-220ENST00000567992 PACSIN2Q9UNF0 486 aaPredicted RBP9.9□□□□□ -0.82
CLK3-220ENST00000567992 ASCC3Q8N3C0 2202 aaKnown RBP9.89□□□□□ -0.83
CLK3-220ENST00000567992 A0A1B0GVT2 93 aa9.89□□□□□ -0.83
CLK3-220ENST00000567992 UPK3BL1B0FP48 263 aa9.89□□□□□ -0.83
CLK3-220ENST00000567992 UPK3BL2E5RIL1 263 aa9.89□□□□□ -0.83
CLK3-220ENST00000567992 KCNK1O00180 336 aa9.89□□□□□ -0.83
CLK3-220ENST00000567992 SLC30A4O14863 429 aa9.89□□□□□ -0.83
CLK3-220ENST00000567992 HTRA2O43464 458 aaPredicted RBP9.89□□□□□ -0.83
CLK3-220ENST00000567992 TSPAN6O43657 245 aa9.89□□□□□ -0.83
CLK3-220ENST00000567992 FTCDO95954 541 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms