RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SUOXP51687 545 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 RHOAP61586 193 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 ZBED6P86452 979 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 BNIP3Q12983 259 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 SGCGQ13326 291 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 FGL2Q14314 439 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 PIGHQ14442 188 aaPredicted RBP4.85□□□□□ -1.63
CLK3-219ENST00000567805 SMAD1Q15797 465 aaKnown RBP4.85□□□□□ -1.63
CLK3-219ENST00000567805 TSR1Q2NL82 804 aaKnown RBP4.85□□□□□ -1.63
CLK3-219ENST00000567805 ZSCAN23Q3MJ62 389 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 HS1BP3Q53T59 392 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 TDRD12Q587J7 1177 aaKnown RBP4.85□□□□□ -1.63
CLK3-219ENST00000567805 ATXN7L2Q5T6C5 722 aaPredicted RBP4.85□□□□□ -1.63
CLK3-219ENST00000567805 HGSNATQ68CP4 663 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 GDPD4Q6W3E5 623 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 KYAT3Q6YP21 454 aaKnown RBP4.85□□□□□ -1.63
CLK3-219ENST00000567805 LEKR1Q6ZMV7 388 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 GCNT7Q6ZNI0 430 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 RFX8Q6ZV50 586 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 CYP4V2Q6ZWL3 525 aaPredicted RBP4.85□□□□□ -1.63
CLK3-219ENST00000567805 TMPRSS7Q7RTY8 843 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 KANSL1Q7Z3B3 1105 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 PTAR1Q7Z6K3 402 aaPredicted RBP4.85□□□□□ -1.63
CLK3-219ENST00000567805 ABI3BPQ7Z7G0 1075 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 TTC7BQ86TV6 843 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 DNAAF5Q86Y56 855 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 GATAD2AQ86YP4 633 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 SLC22A18ASQ8N1D0 253 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 LZTR1Q8N653 840 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 EID2Q8N6I1 236 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 ARFGAP1Q8N6T3 406 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 DENND6BQ8NEG7 585 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 OR13H1Q8NG92 308 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 OR6K2Q8NGY2 324 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 HCAR2Q8TDS4 363 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 ASB12Q8WXK4 309 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 ZCCHC14Q8WYQ9 949 aaKnown RBP4.85□□□□□ -1.63
CLK3-219ENST00000567805 VOPP1Q96AW1 172 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 CNDP2Q96KP4 475 aaKnown RBP4.85□□□□□ -1.63
CLK3-219ENST00000567805 KLHL32Q96NJ5 620 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 PEBP4Q96S96 227 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 MYOCQ99972 504 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 SNRNP25Q9BV90 132 aaKnown RBP4.85□□□□□ -1.63
CLK3-219ENST00000567805 CALN1Q9BXU9 219 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 CPEB1Q9BZB8 566 aaKnown RBP4.85□□□□□ -1.63
CLK3-219ENST00000567805 TRIM7Q9C029 511 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 KLC2Q9H0B6 622 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 ZWILCHQ9H900 591 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 PDFQ9HBH1 243 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 GPR27Q9NS67 375 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 KLHL11Q9NVR0 708 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 GPATCH2LQ9NWQ4 482 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 MYO1AQ9UBC5 1043 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 DKK3Q9UBP4 350 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 UBA2Q9UBT2 640 aaPredicted RBP4.85□□□□□ -1.63
CLK3-219ENST00000567805 PCSK1NQ9UHG2 260 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 ZMIZ1Q9ULJ6 1067 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 CAPN11Q9UMQ6 739 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 CA5BQ9Y2D0 317 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 PCDHGA1Q9Y5H4 931 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 EPG5Q9HCE0 2579 aa4.85□□□□□ -1.63
CLK3-219ENST00000567805 CACNA1BQ00975 2339 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 TSPAN11A1L157 253 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 POM121BA6NF01 834 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 IGLON5A6NGN9 336 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 H3BM21 787 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 H3BRJ5 948 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 J3KR12 359 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 TOR1BO14657 336 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 FPGTO14772 594 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 AREL1O15033 823 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 RAD51BO15315 384 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 SPINT1O43278 529 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 MAP3K7O43318 606 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 PRAMEF11O60813 436 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 RFPL3O75679 317 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 PALMO75781 387 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 KRT37O76014 449 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 TM7SF2O76062 418 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 CAPNS1P04632 268 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 GYPCP04921 128 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 CYP1A2P05177 515 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 ALPPL2P10696 532 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 CKMT2P17540 419 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 ERCC2P18074 760 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 DGKAP23743 735 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 ACP1P24666 158 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 HNF1BP35680 557 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 ABL2P42684 1182 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 CSNK1DP48730 415 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 ACADVLP49748 655 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 PAPOLAP51003 745 aaKnown RBP4.84□□□□□ -1.63
CLK3-219ENST00000567805 CLDN2P57739 230 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 HNRNPKP61978 463 aaKnown RBP eCLIP4.84□□□□□ -1.63
CLK3-219ENST00000567805 IL10RBQ08334 325 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 NSUN2Q08J23 767 aaKnown RBP eCLIP4.84□□□□□ -1.63
CLK3-219ENST00000567805 ELP6Q0PNE2 266 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 DNAJC3Q13217 504 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 ZNF211Q13398 564 aaPredicted RBP4.84□□□□□ -1.63
CLK3-219ENST00000567805 ILKQ13418 452 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms