RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 DKK3Q9UBP4 350 aa7.01□□□□□ -1.29
SF3B3-209ENST00000567635 LHX3Q9UBR4 397 aa7.01□□□□□ -1.29
SF3B3-209ENST00000567635 UBA2Q9UBT2 640 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-209ENST00000567635 IP6K2Q9UHH9 426 aa7.01□□□□□ -1.29
SF3B3-209ENST00000567635 POM121BA6NF01 834 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 A6NNZ2 444 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 H3BRJ5 948 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 MYO1FO00160 1098 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 DFFAO00273 331 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 ENC1O14682 589 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 FPGTO14772 594 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 AREL1O15033 823 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 INSIG1O15503 277 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 CBFA2T2O43439 604 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 MMP20O60882 483 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 PALMO75781 387 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 GYPCP04921 128 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 CYP1A2P05177 515 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 CDK4P11802 303 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 XPAP23025 273 aaPredicted RBP7□□□□□ -1.29
SF3B3-209ENST00000567635 DGKAP23743 735 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 EPHA8P29322 1005 aaPredicted RBP7□□□□□ -1.29
SF3B3-209ENST00000567635 HNRNPH3P31942 346 aaKnown RBP7□□□□□ -1.29
SF3B3-209ENST00000567635 CASP14P31944 242 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 ARL4AP40617 200 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 ABL2P42684 1182 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 CSNK1DP48730 415 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 SUOXP51687 545 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 DPYSQ14117 519 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 FGL2Q14314 439 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 TSR1Q2NL82 804 aaKnown RBP7□□□□□ -1.29
SF3B3-209ENST00000567635 CCDC157Q569K6 752 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 CCDC122Q5T0U0 273 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 GCNT7Q6ZNI0 430 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 TMPRSS7Q7RTY8 843 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 KANSL1Q7Z3B3 1105 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 POLNQ7Z5Q5 900 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 ABI3BPQ7Z7G0 1075 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 SRLQ86TD4 932 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 ARHGAP12Q8IWW6 846 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 GALNT15Q8N3T1 639 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 SLC25A45Q8N413 288 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 LZTR1Q8N653 840 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 NIPA2Q8N8Q9 360 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 OR13H1Q8NG92 308 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 OR8K1Q8NGG5 319 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 VOPP1Q96AW1 172 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 CENPTQ96BT3 561 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 IFT43Q96FT9 208 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 CNDP2Q96KP4 475 aaKnown RBP7□□□□□ -1.29
SF3B3-209ENST00000567635 BMFQ96LC9 184 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 ZNF641Q96N77 438 aaPredicted RBP7□□□□□ -1.29
SF3B3-209ENST00000567635 TUBGCP5Q96RT8 1024 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 KLF6Q99612 283 aaPredicted RBP7□□□□□ -1.29
SF3B3-209ENST00000567635 NUP85Q9BW27 656 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 TMEM121BQ9BXQ6 578 aaPredicted RBP7□□□□□ -1.29
SF3B3-209ENST00000567635 CALN1Q9BXU9 219 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 XPO4Q9C0E2 1151 aaKnown RBP7□□□□□ -1.29
SF3B3-209ENST00000567635 SUV39H2Q9H5I1 410 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 ZWILCHQ9H900 591 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 PDFQ9HBH1 243 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 FZD3Q9NPG1 666 aa7□□□□□ -1.29
SF3B3-209ENST00000567635 IPO11Q9UI26 975 aaKnown RBP7□□□□□ -1.29
SF3B3-209ENST00000567635 ZFC3H1O60293 1989 aaKnown RBP7□□□□□ -1.29
SF3B3-209ENST00000567635 FAM208BQ5VWN6 2430 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 FRYQ5TBA9 3013 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 SPTY2D1-AS1A0A0U1RR47 76 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 NEMP2A6NFY4 417 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 RAD51BO15315 384 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 SPINT1O43278 529 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 BUB1BO60566 1050 aaPredicted RBP6.99□□□□□ -1.29
SF3B3-209ENST00000567635 KRT37O76014 449 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 TM7SF2O76062 418 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 RARAP10276 462 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 CKMT2P17540 419 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 ITIH2P19823 946 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 AMPD1P23109 780 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 IL1R2P27930 398 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 EIF4A3P38919 411 aaKnown RBP6.99□□□□□ -1.29
SF3B3-209ENST00000567635 SSR1P43307 286 aaKnown RBP6.99□□□□□ -1.29
SF3B3-209ENST00000567635 RABIFP47224 123 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 RENBPP51606 427 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 IL10RBQ08334 325 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 NSUN2Q08J23 767 aaKnown RBP eCLIP6.99□□□□□ -1.29
SF3B3-209ENST00000567635 ELP6Q0PNE2 266 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 ZNF211Q13398 564 aaPredicted RBP6.99□□□□□ -1.29
SF3B3-209ENST00000567635 RFTN1Q14699 578 aaPredicted RBP6.99□□□□□ -1.29
SF3B3-209ENST00000567635 DPYSL2Q16555 572 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 HADHQ16836 314 aaKnown RBP6.99□□□□□ -1.29
SF3B3-209ENST00000567635 UGP2Q16851 508 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 TMEM52BQ4KMG9 183 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 HS1BP3Q53T59 392 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 SPECC1LQ69YQ0 1117 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 BRAT1Q6PJG6 821 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 TMCO3Q6UWJ1 677 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 KYAT3Q6YP21 454 aaKnown RBP6.99□□□□□ -1.29
SF3B3-209ENST00000567635 PTAR1Q7Z6K3 402 aaPredicted RBP6.99□□□□□ -1.29
SF3B3-209ENST00000567635 TMPRSS12Q86WS5 348 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 CAMK1DQ8IU85 385 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 NPWQ8N729 165 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms