RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 CCL7P80098 99 aa15.7■□□□□ 0.1
PALB2-205ENST00000567003 PTK2BQ14289 1009 aa15.7■□□□□ 0.1
PALB2-205ENST00000567003 GSE1Q14687 1217 aa15.7■□□□□ 0.1
PALB2-205ENST00000567003 ESRP1Q6NXG1 681 aaKnown RBP15.7■□□□□ 0.1
PALB2-205ENST00000567003 MACC1Q6ZN28 852 aa15.7■□□□□ 0.1
PALB2-205ENST00000567003 ELOA2Q8IYF1 753 aaPredicted RBP15.7■□□□□ 0.1
PALB2-205ENST00000567003 FBXO39Q8N4B4 442 aa15.7■□□□□ 0.1
PALB2-205ENST00000567003 TP53I13Q8NBR0 393 aaPredicted RBP15.7■□□□□ 0.1
PALB2-205ENST00000567003 ASB12Q8WXK4 309 aa15.7■□□□□ 0.1
PALB2-205ENST00000567003 EXTL1Q92935 676 aa15.7■□□□□ 0.1
PALB2-205ENST00000567003 ARHGEF2Q92974 986 aaKnown RBP15.7■□□□□ 0.1
PALB2-205ENST00000567003 TSACCQ96A04 125 aaPredicted RBP15.7■□□□□ 0.1
PALB2-205ENST00000567003 RAB7BQ96AH8 199 aa15.7■□□□□ 0.1
PALB2-205ENST00000567003 C18orf8Q96DM3 657 aa15.7■□□□□ 0.1
PALB2-205ENST00000567003 LIN37Q96GY3 246 aaPredicted RBP15.7■□□□□ 0.1
PALB2-205ENST00000567003 HAPLN3Q96S86 360 aa15.7■□□□□ 0.1
PALB2-205ENST00000567003 EPAS1Q99814 870 aa15.7■□□□□ 0.1
PALB2-205ENST00000567003 PDCL3Q9H2J4 239 aa15.7■□□□□ 0.1
PALB2-205ENST00000567003 DNAI1Q9UI46 699 aa15.7■□□□□ 0.1
PALB2-205ENST00000567003 ATXN7L1Q9ULK2 861 aaPredicted RBP15.7■□□□□ 0.1
PALB2-205ENST00000567003 COQ6Q9Y2Z9 468 aa15.7■□□□□ 0.1
PALB2-205ENST00000567003 PAXBP1Q9Y5B6 917 aa15.7■□□□□ 0.1
PALB2-205ENST00000567003 NOBOXO60393 691 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 GSRP00390 522 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 EIF4A3P38919 411 aaKnown RBP15.69■□□□□ 0.1
PALB2-205ENST00000567003 GABRB2P47870 512 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 ATP11AP98196 1134 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 PPARDQ03181 441 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 IRF4Q15306 451 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 KLHL40Q2TBA0 621 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 MYLK3Q32MK0 819 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 KCTD16Q68DU8 428 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 RWDD4Q6NW29 188 aaKnown RBP15.69■□□□□ 0.1
PALB2-205ENST00000567003 RAB11FIP2Q7L804 512 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 BNIPLQ7Z465 357 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 PHLDB2Q86SQ0 1253 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 VASH2Q86V25 355 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 IRF2BP1Q8IU81 584 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 HID1Q8IV36 788 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 EMC1Q8N766 993 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 TMEM35BQ8NCS4 154 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 ISG20Q96AZ6 181 aaKnown RBP15.69■□□□□ 0.1
PALB2-205ENST00000567003 CPEB1Q9BZB8 566 aaKnown RBP15.69■□□□□ 0.1
PALB2-205ENST00000567003 FAM117AQ9C073 453 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 PISDQ9UG56 409 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 DOLKQ9UPQ8 538 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 HEMK1Q9Y5R4 338 aaPredicted RBP15.69■□□□□ 0.1
PALB2-205ENST00000567003 FLNCQ14315 2725 aa15.69■□□□□ 0.1
PALB2-205ENST00000567003 ANKRD36A6QL64 1941 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 A0A1W2PQM1 296 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 D6RAR5 112 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 FAM72CH0Y354 149 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 GADD45BO75293 160 aaPredicted RBP15.68■□□□□ 0.1
PALB2-205ENST00000567003 FGFR1OPO95684 399 aaKnown RBP15.68■□□□□ 0.1
PALB2-205ENST00000567003 RPLP0P05388 317 aaKnown RBP15.68■□□□□ 0.1
PALB2-205ENST00000567003 CDH5P33151 784 aaPredicted RBP15.68■□□□□ 0.1
PALB2-205ENST00000567003 MLLT3P42568 568 aaPredicted RBP15.68■□□□□ 0.1
PALB2-205ENST00000567003 CDO1Q16878 200 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 C15orf59Q2T9L4 293 aaPredicted RBP15.68■□□□□ 0.1
PALB2-205ENST00000567003 ALG11Q2TAA5 492 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 FAM72AQ5TYM5 149 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 MANEALQ5VSG8 457 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 FAM72DQ6L9T8 149 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 GDPD4Q6W3E5 623 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 USP53Q70EK8 1073 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 RD3Q7Z3Z2 195 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 TTC7BQ86TV6 843 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 ZSCAN30Q86W11 494 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 NLRP14Q86W24 1093 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 FAM72BQ86X60 149 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 FAM71AQ8IYT1 594 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 ARL10Q8N8L6 244 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 OR2AP1Q8NGE2 309 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 WDR48Q8TAF3 677 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 CXorf40AQ8TE69 158 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 GFM1Q96RP9 751 aaKnown RBP15.68■□□□□ 0.1
PALB2-205ENST00000567003 METTL5Q9NRN9 209 aaKnown RBP15.68■□□□□ 0.1
PALB2-205ENST00000567003 PPARGC1AQ9UBK2 798 aaKnown RBP15.68■□□□□ 0.1
PALB2-205ENST00000567003 TMEM59LQ9UK28 342 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 NEU3Q9UQ49 428 aa15.68■□□□□ 0.1
PALB2-205ENST00000567003 RIOK3O14730 519 aaKnown RBP15.67■□□□□ 0.1
PALB2-205ENST00000567003 INSIG1O15503 277 aa15.67■□□□□ 0.1
PALB2-205ENST00000567003 TM7SF2O76062 418 aa15.67■□□□□ 0.1
PALB2-205ENST00000567003 GJB6O95452 261 aa15.67■□□□□ 0.1
PALB2-205ENST00000567003 FAM87AP0C7U9 286 aa15.67■□□□□ 0.1
PALB2-205ENST00000567003 CYP11B1P15538 503 aa15.67■□□□□ 0.1
PALB2-205ENST00000567003 ITIH1P19827 911 aa15.67■□□□□ 0.1
PALB2-205ENST00000567003 SCNN1AP37088 669 aa15.67■□□□□ 0.1
PALB2-205ENST00000567003 MTIF2P46199 727 aaKnown RBP15.67■□□□□ 0.1
PALB2-205ENST00000567003 INHBCP55103 352 aa15.67■□□□□ 0.1
PALB2-205ENST00000567003 SNRPD1P62314 119 aaKnown RBP15.67■□□□□ 0.1
PALB2-205ENST00000567003 YPEL5P62699 121 aa15.67■□□□□ 0.1
PALB2-205ENST00000567003 RAPGEF1Q13905 1077 aa15.67■□□□□ 0.1
PALB2-205ENST00000567003 POLD3Q15054 466 aaPredicted RBP15.67■□□□□ 0.1
PALB2-205ENST00000567003 DPY19L2P1Q6NXN4 242 aa15.67■□□□□ 0.1
PALB2-205ENST00000567003 SFTPA2Q8IWL1 248 aa15.67■□□□□ 0.1
PALB2-205ENST00000567003 PLPP6Q8IY26 295 aa15.67■□□□□ 0.1
PALB2-205ENST00000567003 PIP4P2Q8N4L2 257 aa15.67■□□□□ 0.1
PALB2-205ENST00000567003 Q8N9G6 341 aaPredicted RBP15.67■□□□□ 0.1
PALB2-205ENST00000567003 CPA5Q8WXQ8 436 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms