RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-215	ENST00000566682	FATE1	Q969F0	183 aa		13.85	□□□□□ -0.19
SPG7-215	ENST00000566682	PDLIM2	Q96JY6	352 aa		13.85	□□□□□ -0.19
SPG7-215	ENST00000566682	NSMCE3	Q96MG7	304 aa		13.85	□□□□□ -0.19
SPG7-215	ENST00000566682	ZNF830	Q96NB3	372 aa	Predicted RBP	13.85	□□□□□ -0.19
SPG7-215	ENST00000566682	TUBGCP5	Q96RT8	1024 aa		13.85	□□□□□ -0.19
SPG7-215	ENST00000566682	LGMN	Q99538	433 aa		13.85	□□□□□ -0.19
SPG7-215	ENST00000566682	MIR1-1HG	Q9H1L0	117 aa		13.85	□□□□□ -0.19
SPG7-215	ENST00000566682	SUV39H2	Q9H5I1	410 aa		13.85	□□□□□ -0.19
SPG7-215	ENST00000566682	EBF2	Q9HAK2	575 aa		13.85	□□□□□ -0.19
SPG7-215	ENST00000566682	LZTFL1	Q9NQ48	299 aa		13.85	□□□□□ -0.19
SPG7-215	ENST00000566682	SAE1	Q9UBE0	346 aa	Predicted RBP	13.85	□□□□□ -0.19
SPG7-215	ENST00000566682	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.85	□□□□□ -0.19
SPG7-215	ENST00000566682	PTPRZ1	P23471	2315 aa	Predicted RBP	13.85	□□□□□ -0.19
SPG7-215	ENST00000566682	MIF4GD	A9UHW6	222 aa	Known RBP	13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	KHNYN	O15037	678 aa	Known RBP	13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	PYGM	P11217	842 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	CCNB1	P14635	433 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	GNS	P15586	552 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	CR2	P20023	1033 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	TGM2	P21980	687 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	HSPA9	P38646	679 aa	Known RBP	13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	NR2C2	P49116	596 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	CCR5	P51681	352 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	MAX	P61244	160 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	PPP2CB	P62714	309 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	PPP2CA	P67775	309 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	IRX4	P78413	519 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	PPID	Q08752	370 aa	Known RBP	13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	PDK1	Q15118	436 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	PPP2R5E	Q16537	467 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	TRIM61	Q5EBN2	209 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	NEK5	Q6P3R8	708 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	SLC23A3	Q6PIS1	610 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	BZW1	Q7L1Q6	419 aa	Known RBP	13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	TTC7B	Q86TV6	843 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	CCDC13	Q8IYE1	715 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	C12orf50	Q8NA57	414 aa	Predicted RBP	13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	C1orf216	Q8TAB5	229 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	CEP76	Q8TAP6	659 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	HCAR2	Q8TDS4	363 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	ZNF641	Q96N77	438 aa	Predicted RBP	13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	OLFM3	Q96PB7	478 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	NUDCD1	Q96RS6	583 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	MGME1	Q9BQP7	344 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	ORAI3	Q9BRQ5	295 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	HEMGN	Q9BXL5	484 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	PREB	Q9HCU5	417 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	NT5M	Q9NPB1	228 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	DKK3	Q9UBP4	350 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	SUSD2	Q9UGT4	822 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	PPP2R2C	Q9Y2T4	447 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	FADS3	Q9Y5Q0	445 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	SLCO1B1	Q9Y6L6	691 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682	TRPM6	Q9BX84	2022 aa		13.84	□□□□□ -0.19
SPG7-215	ENST00000566682		A0A1B0GTW7	788 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682		A0A1W2PPC4	97 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	BCAT2	O15382	392 aa	Predicted RBP	13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	DDX3Y	O15523	660 aa	Known RBP	13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	LAT	O43561	262 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	AP1G1	O43747	822 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	FOXD2	O60548	495 aa	Predicted RBP	13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	RNGTT	O60942	597 aa	Known RBP	13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	PCDH8	O95206	1070 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	CFI	P05156	583 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	PTMA	P06454	111 aa	Known RBP	13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	SERPINF2	P08697	491 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	PECAM1	P16284	738 aa	Predicted RBP	13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	CD27	P26842	260 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	SERPINA4	P29622	427 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	MAT2A	P31153	395 aa	Known RBP	13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	ABL2	P42684	1182 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	MAPK8	P45983	427 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	AP1S1	P61966	158 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	BCL2L1	Q07817	233 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	ITK	Q08881	620 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	AP1B1	Q10567	949 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	AADACL2	Q6P093	401 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	B4GALNT4	Q76KP1	1039 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	RABEPK	Q7Z6M1	372 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	PRPF39	Q86UA1	669 aa	Known RBP	13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	TRIM69	Q86WT6	500 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	ZCCHC9	Q8N567	271 aa	Known RBP	13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	UBL4B	Q8N7F7	174 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	P3H4	Q92791	437 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	RAB7B	Q96AH8	199 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	HES6	Q96HZ4	224 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	HERPUD2	Q9BSE4	406 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	NUSAP1	Q9BXS6	441 aa	Known RBP	13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	OSBPL8	Q9BZF1	889 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	KCNF1	Q9H3M0	494 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	ATP13A3	Q9H7F0	1226 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	RXFP3	Q9NSD7	469 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	TPX2	Q9ULW0	747 aa	Known RBP	13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	SLC6A14	Q9UN76	642 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	EFR3B	Q9Y2G0	817 aa		13.83	□□□□□ -0.2
SPG7-215	ENST00000566682	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.82	□□□□□ -0.2
SPG7-215	ENST00000566682		A0A1W2PQU0	124 aa		13.82	□□□□□ -0.2
SPG7-215	ENST00000566682	TSPAN11	A1L157	253 aa		13.82	□□□□□ -0.2
SPG7-215	ENST00000566682	KCNK1	O00180	336 aa		13.82	□□□□□ -0.2

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