RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 MAGOHBQ96A72 148 aaKnown RBP11.61□□□□□ -0.55
KARS-207ENST00000566560 SIPA1Q96FS4 1042 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 PPP1R16AQ96I34 528 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 TEKT5Q96M29 485 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 TUBGCP5Q96RT8 1024 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 FAM129BQ96TA1 746 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 SEMA3CQ99985 751 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 ATP13A3Q9H7F0 1226 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 RSPH14Q9UHP6 348 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 TRHDEQ9UKU6 1024 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 ATP8A1Q9Y2Q0 1164 aa11.61□□□□□ -0.55
KARS-207ENST00000566560 TTC24A2A3L6 582 aaPredicted RBP11.6□□□□□ -0.55
KARS-207ENST00000566560 CFAP99D6REC4 459 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 F5H423 210 aaPredicted RBP11.6□□□□□ -0.55
KARS-207ENST00000566560 PDE2AO00408 941 aaPredicted RBP11.6□□□□□ -0.55
KARS-207ENST00000566560 KPNA3O00505 521 aaPredicted RBP11.6□□□□□ -0.55
KARS-207ENST00000566560 MID1O15344 667 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 ZNF500O60304 480 aaPredicted RBP11.6□□□□□ -0.55
KARS-207ENST00000566560 OPHN1O60890 802 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 POP4O95707 220 aaKnown RBP11.6□□□□□ -0.55
KARS-207ENST00000566560 IFNB1P01574 187 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 DNTTP04053 509 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 ACADMP11310 421 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 NFKB1P19838 968 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 SERPINA4P29622 427 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 PXNP49023 591 aaPredicted RBP11.6□□□□□ -0.55
KARS-207ENST00000566560 FNTAP49354 379 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 ZBTB16Q05516 673 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 NSUN2Q08J23 767 aaKnown RBP eCLIP11.6□□□□□ -0.55
KARS-207ENST00000566560 P3H1Q32P28 736 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 CFAP58Q5T655 872 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 FAM46CQ5VWP2 391 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 TTC27Q6P3X3 843 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 NCEH1Q6PIU2 408 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 TSSK4Q6SA08 328 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 ARHGEF18Q6ZSZ5 1173 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 GSTA5Q7RTV2 222 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 PID1Q7Z2X4 250 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 PAF1Q8N7H5 531 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 CCDC110Q8TBZ0 833 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 RTP4Q96DX8 246 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 LRIG1Q96JA1 1093 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 LRFN3Q9BTN0 628 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 OSBPL1AQ9BXW6 950 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 TPSD1Q9BZJ3 242 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 GBA3Q9H227 469 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 PABPC3Q9H361 631 aaKnown RBP11.6□□□□□ -0.55
KARS-207ENST00000566560 USP29Q9HBJ7 922 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 NOD2Q9HC29 1040 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 GLOD4Q9HC38 313 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 DYRK4Q9NR20 520 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 CDC23Q9UJX2 597 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 SARDHQ9UL12 918 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 PPM1HQ9ULR3 514 aa11.6□□□□□ -0.55
KARS-207ENST00000566560 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.59□□□□□ -0.55
KARS-207ENST00000566560 C5orf60A6NFR6 353 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 CCDC188H7C350 402 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 AXIN1O15169 862 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 SOCS5O75159 536 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 SERPINF2P08697 491 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 TDGF1P13385 188 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 C5AR1P21730 350 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 CA4P22748 312 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 ITGB7P26010 798 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 PSMB4P28070 264 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 STIP1P31948 543 aaKnown RBP11.59□□□□□ -0.55
KARS-207ENST00000566560 SLC8A1P32418 973 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 CD68P34810 354 aaPredicted RBP11.59□□□□□ -0.55
KARS-207ENST00000566560 ACTN2P35609 894 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 COILP38432 576 aaPredicted RBP11.59□□□□□ -0.55
KARS-207ENST00000566560 CD86P42081 329 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 KCNJ1P48048 391 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 METAP1P53582 386 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 CSTF1Q05048 431 aaKnown RBP11.59□□□□□ -0.55
KARS-207ENST00000566560 BCL2L1Q07817 233 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 NIPAL4Q0D2K0 466 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 ANGPT1Q15389 498 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 WHAMMP3Q1A5X7 153 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 ANKRD20A2Q5SQ80 823 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 ANKRD20A1Q5TYW2 823 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 ANKRD20A3Q5VUR7 823 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 CCDC137Q6PK04 289 aaKnown RBP11.59□□□□□ -0.55
KARS-207ENST00000566560 GDPD4Q6W3E5 623 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 PARS2Q7L3T8 475 aaKnown RBP11.59□□□□□ -0.55
KARS-207ENST00000566560 MAML2Q8IZL2 1156 aaPredicted RBP11.59□□□□□ -0.55
KARS-207ENST00000566560 FAM160A2Q8N612 972 aaPredicted RBP11.59□□□□□ -0.55
KARS-207ENST00000566560 TMIEQ8NEW7 156 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 ARRDC2Q8TBH0 407 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 GANCQ8TET4 914 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 GRK7Q8WTQ7 553 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 ARRDC3Q96B67 414 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 IMP4Q96G21 291 aaKnown RBP11.59□□□□□ -0.55
KARS-207ENST00000566560 KLHL32Q96NJ5 620 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 CPEB1Q9BZB8 566 aaKnown RBP11.59□□□□□ -0.55
KARS-207ENST00000566560 DDX47Q9H0S4 455 aaKnown RBP11.59□□□□□ -0.55
KARS-207ENST00000566560 SLC25A51Q9H1U9 297 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 CD93Q9NPY3 652 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 FBXO4Q9UKT5 387 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 SCML1Q9UN30 329 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 MRFAP1Q9Y605 127 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms