RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 AP4E1Q9UPM8 1137 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 U3KQA8 63 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 IGSF10Q6WRI0 2623 aa18.55■□□□□ 0.56
USB1-213ENST00000566292 COL27A1Q8IZC6 1860 aaPredicted RBP18.54■□□□□ 0.56
USB1-213ENST00000566292 K7ESM1 405 aa18.54■□□□□ 0.56
USB1-213ENST00000566292 MMP20O60882 483 aa18.54■□□□□ 0.56
USB1-213ENST00000566292 PIGNO95427 931 aa18.54■□□□□ 0.56
USB1-213ENST00000566292 HTR7P34969 479 aa18.54■□□□□ 0.56
USB1-213ENST00000566292 IGFALSP35858 605 aa18.54■□□□□ 0.56
USB1-213ENST00000566292 EIF2B5Q13144 721 aaKnown RBP18.54■□□□□ 0.56
USB1-213ENST00000566292 ASIC2Q16515 512 aa18.54■□□□□ 0.56
USB1-213ENST00000566292 PPP1R2P3Q6NXS1 205 aa18.54■□□□□ 0.56
USB1-213ENST00000566292 CACTIN-AS1Q8N1I8 211 aa18.54■□□□□ 0.56
USB1-213ENST00000566292 DCBLD1Q8N8Z6 715 aa18.54■□□□□ 0.56
USB1-213ENST00000566292 ZNF548Q8NEK5 533 aaPredicted RBP18.54■□□□□ 0.56
USB1-213ENST00000566292 CELF6Q96J87 481 aaKnown RBP18.54■□□□□ 0.56
USB1-213ENST00000566292 APOLD1Q96LR9 279 aa18.54■□□□□ 0.56
USB1-213ENST00000566292 NAP1L5Q96NT1 182 aaPredicted RBP18.54■□□□□ 0.56
USB1-213ENST00000566292 SNRNP25Q9BV90 132 aaKnown RBP18.54■□□□□ 0.56
USB1-213ENST00000566292 CPEB1Q9BZB8 566 aaKnown RBP18.54■□□□□ 0.56
USB1-213ENST00000566292 DHX35Q9H5Z1 703 aaKnown RBP18.54■□□□□ 0.56
USB1-213ENST00000566292 SCUBE2Q9NQ36 999 aa18.54■□□□□ 0.56
USB1-213ENST00000566292 AIPL1Q9NZN9 384 aa18.54■□□□□ 0.56
USB1-213ENST00000566292 DKK3Q9UBP4 350 aa18.54■□□□□ 0.56
USB1-213ENST00000566292 CLCA2Q9UQC9 943 aa18.54■□□□□ 0.56
USB1-213ENST00000566292 LRP4O75096 1905 aa18.53■□□□□ 0.56
USB1-213ENST00000566292 NEMP2A6NFY4 417 aa18.53■□□□□ 0.56
USB1-213ENST00000566292 TMEM191CA6NGB0 347 aa18.53■□□□□ 0.56
USB1-213ENST00000566292 SMTNL1A8MU46 457 aa18.53■□□□□ 0.56
USB1-213ENST00000566292 J3KR12 359 aa18.53■□□□□ 0.56
USB1-213ENST00000566292 ALPPL2P10696 532 aa18.53■□□□□ 0.56
USB1-213ENST00000566292 DESP17661 470 aa18.53■□□□□ 0.56
USB1-213ENST00000566292 PRKCIP41743 596 aa18.53■□□□□ 0.56
USB1-213ENST00000566292 E2F1Q01094 437 aa18.53■□□□□ 0.56
USB1-213ENST00000566292 RTP5Q14D33 572 aa18.53■□□□□ 0.56
USB1-213ENST00000566292 CYP4V2Q6ZWL3 525 aaPredicted RBP18.53■□□□□ 0.56
USB1-213ENST00000566292 PDZD3Q86UT5 571 aa18.53■□□□□ 0.56
USB1-213ENST00000566292 VPS36Q86VN1 386 aa18.53■□□□□ 0.56
USB1-213ENST00000566292 FAM181AQ8N9Y4 354 aa18.53■□□□□ 0.56
USB1-213ENST00000566292 KCTD15Q96SI1 283 aaPredicted RBP18.53■□□□□ 0.56
USB1-213ENST00000566292 SLC39A8Q9C0K1 460 aa18.53■□□□□ 0.56
USB1-213ENST00000566292 NRSN2Q9GZP1 204 aa18.53■□□□□ 0.56
USB1-213ENST00000566292 UBA2Q9UBT2 640 aaPredicted RBP18.53■□□□□ 0.56
USB1-213ENST00000566292 PCSK1NQ9UHG2 260 aa18.53■□□□□ 0.56
USB1-213ENST00000566292 IPO11Q9UI26 975 aaKnown RBP18.53■□□□□ 0.56
USB1-213ENST00000566292 PNMA8BQ9ULN7 279 aaPredicted RBP18.53■□□□□ 0.56
USB1-213ENST00000566292 RP1P56715 2156 aa18.52■□□□□ 0.56
USB1-213ENST00000566292 A0A087WV48 116 aa18.52■□□□□ 0.56
USB1-213ENST00000566292 A0A1B0GTH6 734 aa18.52■□□□□ 0.56
USB1-213ENST00000566292 A0A1W2PQC6 194 aa18.52■□□□□ 0.56
USB1-213ENST00000566292 EEF2KO00418 725 aaKnown RBP18.52■□□□□ 0.56
USB1-213ENST00000566292 DDX3XO00571 662 aaKnown RBP eCLIP18.52■□□□□ 0.562e-15■■■■■ 27.4
USB1-213ENST00000566292 TLX3O43711 291 aaPredicted RBP18.52■□□□□ 0.56
USB1-213ENST00000566292 PRAMEF11O60813 436 aa18.52■□□□□ 0.56
USB1-213ENST00000566292 TM7SF2O76062 418 aa18.52■□□□□ 0.56
USB1-213ENST00000566292 MT-CO3P00414 261 aa18.52■□□□□ 0.56
USB1-213ENST00000566292 FTLP02792 175 aaPredicted RBP18.52■□□□□ 0.56
USB1-213ENST00000566292 GZMAP12544 262 aa18.52■□□□□ 0.56
USB1-213ENST00000566292 NDST2P52849 883 aa18.52■□□□□ 0.56
USB1-213ENST00000566292 FILIP1LQ4L180 1135 aa18.52■□□□□ 0.56
USB1-213ENST00000566292 ERMARDQ5T6L9 678 aa18.52■□□□□ 0.56
USB1-213ENST00000566292 CAVIN1Q6NZI2 390 aaKnown RBP18.52■□□□□ 0.56
USB1-213ENST00000566292 TP53I13Q8NBR0 393 aaPredicted RBP18.52■□□□□ 0.56
USB1-213ENST00000566292 CXorf40AQ8TE69 158 aa18.52■□□□□ 0.56
USB1-213ENST00000566292 WRAP53Q9BUR4 548 aaKnown RBP18.52■□□□□ 0.56
USB1-213ENST00000566292 DUSP23Q9BVJ7 150 aa18.52■□□□□ 0.56
USB1-213ENST00000566292 MBNL1Q9NR56 388 aaKnown RBP18.52■□□□□ 0.56
USB1-213ENST00000566292 AK5Q9Y6K8 562 aa18.52■□□□□ 0.56
USB1-213ENST00000566292 ATRXP46100 2492 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 TSPAN11A1L157 253 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 EIF3CLB5ME19 914 aaKnown RBP18.51■□□□□ 0.55
USB1-213ENST00000566292 H3BM21 787 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 AQP9O43315 295 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 BUB1BO60566 1050 aaPredicted RBP18.51■□□□□ 0.55
USB1-213ENST00000566292 JUNDP17535 347 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 MIPP30301 263 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 RGRP47804 291 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 ZNF165P49910 485 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 PAPOLAP51003 745 aaKnown RBP18.51■□□□□ 0.55
USB1-213ENST00000566292 SEMG2Q02383 582 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 IQCB1Q15051 598 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 KLHL40Q2TBA0 621 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 TMEM52BQ4KMG9 183 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 AFMIDQ63HM1 303 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 RFX8Q6ZV50 586 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 ARHGAP12Q8IWW6 846 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 RBFAQ8N0V3 343 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 FNIP1Q8TF40 1166 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 EIF3CQ99613 913 aaKnown RBP18.51■□□□□ 0.55
USB1-213ENST00000566292 NCAPGQ9BPX3 1015 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 FUCA2Q9BTY2 467 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 TCEAL2Q9H3H9 227 aaPredicted RBP18.51■□□□□ 0.55
USB1-213ENST00000566292 SUV39H2Q9H5I1 410 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 CNOT8Q9UFF9 292 aaKnown RBP18.51■□□□□ 0.55
USB1-213ENST00000566292 COQ6Q9Y2Z9 468 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 CSNK1G3Q9Y6M4 447 aa18.51■□□□□ 0.55
USB1-213ENST00000566292 ARHGAP42A6NI28 874 aa18.5■□□□□ 0.55
USB1-213ENST00000566292 OPA1O60313 960 aa18.5■□□□□ 0.55
USB1-213ENST00000566292 SKILP12757 684 aa18.5■□□□□ 0.55
USB1-213ENST00000566292 ERCC2P18074 760 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms