RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 SNRNP25Q9BV90 132 aaKnown RBP17.64■□□□□ 0.41
MAP1LC3B-207ENST00000565788 DHX35Q9H5Z1 703 aaKnown RBP17.64■□□□□ 0.41
MAP1LC3B-207ENST00000565788 PDFQ9HBH1 243 aa17.64■□□□□ 0.41
MAP1LC3B-207ENST00000565788 NLGN3Q9NZ94 848 aa17.64■□□□□ 0.41
MAP1LC3B-207ENST00000565788 UBA2Q9UBT2 640 aaPredicted RBP17.64■□□□□ 0.41
MAP1LC3B-207ENST00000565788 PCSK1NQ9UHG2 260 aa17.64■□□□□ 0.41
MAP1LC3B-207ENST00000565788 IPO11Q9UI26 975 aaKnown RBP17.64■□□□□ 0.41
MAP1LC3B-207ENST00000565788 KLF15Q9UIH9 416 aa17.64■□□□□ 0.41
MAP1LC3B-207ENST00000565788 LY6G6EA0A0G2JKS1 128 aa17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 A0A1B0GTH6 734 aa17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 A0A1W2PQC6 194 aa17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 J3KR12 359 aa17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 K7ESM1 405 aa17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 EEF2KO00418 725 aaKnown RBP17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 SCAMP1O15126 338 aa17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 MMP20O60882 483 aa17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 CKMT1AP12532 417 aa17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 HOXB3P14651 431 aaPredicted RBP17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 NME1P15531 152 aaKnown RBP17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 TIMP2P16035 220 aa17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 EIF2B5Q13144 721 aaKnown RBP17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 VPS36Q86VN1 386 aa17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 CXorf40AQ8TE69 158 aa17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 CENPTQ96BT3 561 aa17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 NAP1L5Q96NT1 182 aaPredicted RBP17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 KCTD15Q96SI1 283 aaPredicted RBP17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 NCAPGQ9BPX3 1015 aa17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 SLC39A8Q9C0K1 460 aa17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 AIPL1Q9NZN9 384 aa17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 DKK3Q9UBP4 350 aa17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 CLCA2Q9UQC9 943 aa17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 U3KQA8 63 aa17.63■□□□□ 0.41
MAP1LC3B-207ENST00000565788 NEMP2A6NFY4 417 aa17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 TMEM191CA6NGB0 347 aa17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 H3BM21 787 aa17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 DDX3XO00571 662 aaKnown RBP eCLIP17.62■□□□□ 0.412e-11■■■■■ 29.6
MAP1LC3B-207ENST00000565788 PRAMEF11O60813 436 aa17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 TM7SF2O76062 418 aa17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 FTLP02792 175 aaPredicted RBP17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 JUNDP17535 347 aa17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 PRKCIP41743 596 aa17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 ZNF165P49910 485 aa17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 NDST2P52849 883 aa17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 E2F1Q01094 437 aa17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 ERMARDQ5T6L9 678 aa17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 CYP4V2Q6ZWL3 525 aaPredicted RBP17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 DCBLD1Q8N8Z6 715 aa17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 FAM181AQ8N9Y4 354 aa17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 TP53I13Q8NBR0 393 aaPredicted RBP17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 WRAP53Q9BUR4 548 aaKnown RBP17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 CPEB1Q9BZB8 566 aaKnown RBP17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 NRSN2Q9GZP1 204 aa17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 SCUBE2Q9NQ36 999 aa17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 MBNL1Q9NR56 388 aaKnown RBP17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 CNOT8Q9UFF9 292 aaKnown RBP17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 ANKRD36A6QL64 1941 aa17.62■□□□□ 0.41
MAP1LC3B-207ENST00000565788 A0A087WV48 116 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 AQP9O43315 295 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 MT-CO3P00414 261 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 GZMAP12544 262 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 ERCC2P18074 760 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 MIPP30301 263 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 RGRP47804 291 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 PAPOLAP51003 745 aaKnown RBP17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 SEMG2Q02383 582 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 KLHL30Q0D2K2 578 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 RTP5Q14D33 572 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 IQCB1Q15051 598 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 KLHL40Q2TBA0 621 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 TMEM52BQ4KMG9 183 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 PDZD3Q86UT5 571 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 ARHGAP12Q8IWW6 846 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 RBFAQ8N0V3 343 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 CACTIN-AS1Q8N1I8 211 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 LMX1AQ8TE12 382 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 FNIP1Q8TF40 1166 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 ZNF653Q96CK0 615 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 FUCA2Q9BTY2 467 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 DUSP23Q9BVJ7 150 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 TCEAL2Q9H3H9 227 aaPredicted RBP17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 DONSONQ9NYP3 566 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 PNMA8BQ9ULN7 279 aaPredicted RBP17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 COQ6Q9Y2Z9 468 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 AK5Q9Y6K8 562 aa17.61■□□□□ 0.41
MAP1LC3B-207ENST00000565788 TSPAN11A1L157 253 aa17.6■□□□□ 0.41
MAP1LC3B-207ENST00000565788 ARHGAP42A6NI28 874 aa17.6■□□□□ 0.41
MAP1LC3B-207ENST00000565788 EIF3CLB5ME19 914 aaKnown RBP17.6■□□□□ 0.41
MAP1LC3B-207ENST00000565788 TLX3O43711 291 aaPredicted RBP17.6■□□□□ 0.41
MAP1LC3B-207ENST00000565788 RNF8O76064 485 aa17.6■□□□□ 0.41
MAP1LC3B-207ENST00000565788 SKILP12757 684 aa17.6■□□□□ 0.41
MAP1LC3B-207ENST00000565788 XPAP23025 273 aaPredicted RBP17.6■□□□□ 0.41
MAP1LC3B-207ENST00000565788 IRF4Q15306 451 aa17.6■□□□□ 0.41
MAP1LC3B-207ENST00000565788 AFMIDQ63HM1 303 aa17.6■□□□□ 0.41
MAP1LC3B-207ENST00000565788 RFX8Q6ZV50 586 aa17.6■□□□□ 0.41
MAP1LC3B-207ENST00000565788 NPWQ8N729 165 aa17.6■□□□□ 0.41
MAP1LC3B-207ENST00000565788 DCBLD2Q96PD2 775 aa17.6■□□□□ 0.41
MAP1LC3B-207ENST00000565788 EIF3CQ99613 913 aaKnown RBP17.6■□□□□ 0.41
MAP1LC3B-207ENST00000565788 C1QTNF7Q9BXJ2 289 aa17.6■□□□□ 0.41
MAP1LC3B-207ENST00000565788 SUV39H2Q9H5I1 410 aa17.6■□□□□ 0.41
MAP1LC3B-207ENST00000565788 CSNK1G3Q9Y6M4 447 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms