RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 H3BRJ5 948 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 RAD51BO15315 384 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 PRAMEF11O60813 436 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 MMP20O60882 483 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 TRIM16O95361 564 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 PRKCGP05129 697 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 H2AFZP0C0S5 128 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 RARAP10276 462 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 HOXB3P14651 431 aaPredicted RBP13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 HTR7P34969 479 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 ARL4AP40617 200 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 RPS21P63220 83 aaKnown RBP13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 SEMG2Q02383 582 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 DNAJC3Q13217 504 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 SGCGQ13326 291 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 PIGHQ14442 188 aaPredicted RBP13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 ACAP1Q15027 740 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 TMEM259Q4ZIN3 620 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 ZNF542PQ5EBM4 170 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 KIAA1161Q6NSJ0 714 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 GCNT7Q6ZNI0 430 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 H2AFVQ71UI9 128 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 MARCH9Q86YJ5 346 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 CPNE8Q86YQ8 564 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 ARHGAP12Q8IWW6 846 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 PLPP6Q8IY26 295 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 TMEM145Q8NBT3 493 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 SAP25Q8TEE9 199 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 CTNNBL1Q8WYA6 563 aaPredicted RBP13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 LRIG1Q96JA1 1093 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 CNDP2Q96KP4 475 aaKnown RBP13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 WRAP53Q9BUR4 548 aaKnown RBP13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 CINPQ9BW66 212 aaPredicted RBP13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 OSBPL1AQ9BXW6 950 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 PDFQ9HBH1 243 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 DONSONQ9NYP3 566 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 CTTNBP2NLQ9P2B4 639 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 WDFY3Q8IZQ1 3526 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 PLXNB3Q9ULL4 1909 aa13.8□□□□□ -0.2
VPS9D1-204ENST00000565023 CXorf51AA0A1B0GTR3 108 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 A6NNZ2 444 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 EIF3CLB5ME19 914 aaKnown RBP13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 TNFSF14O43557 240 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 PALMO75781 387 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 LCA5LO95447 670 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 LDOC1O95751 146 aaPredicted RBP13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 TMEM253P0C7T8 217 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 PCK1P35558 622 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 RGRP47804 291 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 KRT81Q14533 505 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 INO80DQ53TQ3 878 aaPredicted RBP13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 CFAP58Q5T655 872 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 Q6ZSR6 202 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 RAB44Q7Z6P3 723 aaPredicted RBP13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 IQCHQ86VS3 1027 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 CCDC170Q8IYT3 715 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 OXR1Q8N573 874 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 NIPA2Q8N8Q9 360 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 TSEN2Q8NCE0 465 aaKnown RBP13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 ZNF564Q8TBZ8 553 aaPredicted RBP13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 CXorf40AQ8TE69 158 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 ADAMTS14Q8WXS8 1223 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 EIF3CQ99613 913 aaKnown RBP13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 ETNK2Q9NVF9 386 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 KLHL11Q9NVR0 708 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 TOR4AQ9NXH8 423 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 IP6K2Q9UHH9 426 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 IPO11Q9UI26 975 aaKnown RBP13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 NEUROG3Q9Y4Z2 214 aa13.79□□□□□ -0.2
VPS9D1-204ENST00000565023 GOLGA4Q13439 2230 aaKnown RBP13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 TTC24A2A3L6 582 aaPredicted RBP13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 POM121BA6NF01 834 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 MYO1FO00160 1098 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 ENC1O14682 589 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 YKT6O15498 198 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 FFAR2O15552 330 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 SPINT1O43278 529 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 TSPAN6O43657 245 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 AP1G1O43747 822 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 TIMP2P16035 220 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 CDH6P55285 790 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 CLDN6P56747 220 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 OVGP1Q12889 678 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 MMRN1Q13201 1228 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 DPYSQ14117 519 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 BOLA3Q53S33 107 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 ZFYVE27Q5T4F4 411 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 GLRX5Q86SX6 157 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 CAMK1DQ8IU85 385 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 TMTC1Q8IUR5 882 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 PSTKQ8IV42 348 aaKnown RBP13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 SLC22A18ASQ8N1D0 253 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 SPC24Q8NBT2 197 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 COL26A1Q96A83 441 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 RAB7BQ96AH8 199 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 VOPP1Q96AW1 172 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 BMFQ96LC9 184 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 ERVMER34-1Q9H9K5 563 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 PCDH18Q9HCL0 1135 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 DNAJC28Q9NX36 388 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms