RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 TMTC4Q5T4D3 741 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 C16orf89Q6UX73 402 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 TPGS1Q6ZTW0 290 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 PQLC3Q8N755 202 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 RPRD1AQ96P16 312 aaPredicted RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 ERP44Q9BS26 406 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 ROGDIQ9GZN7 287 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 ANKEF1Q9NU02 776 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 ZDHHC18Q9NUE0 388 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 FETUBQ9UGM5 382 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 KCTD3Q9Y597 815 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 PDE4DIPQ5VU43 2346 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 TMEM120BA0PK00 339 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 TRIM64BA6NI03 449 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 IGHEP01854 428 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 RARGP13631 454 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 SDHBP21912 280 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 PTGIRP43119 386 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 TUBP50607 506 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 CDK7P50613 346 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 AP1S2P56377 157 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 RWDD2BP57060 319 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 ARPC4P59998 168 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 OCA2Q04671 838 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 PTP4A2Q12974 167 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 WDR93Q6P2C0 686 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 DSTYKQ6XUX3 929 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 SFTPA1Q8IWL2 248 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 MTMR14Q8NCE2 650 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 FAF2Q96CS3 445 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 SNRNP25Q9BV90 132 aaKnown RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 MRPS26Q9BYN8 205 aaKnown RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 ISCUQ9H1K1 167 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 XPNPEP3Q9NQH7 507 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 SYBUQ9NX95 663 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 GIMAP2Q9UG22 337 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 GTF2IRD1Q9UHL9 959 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 MTO1Q9Y2Z2 717 aaKnown RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 NEU2Q9Y3R4 380 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 A0A0A6YYK5 440 aaPredicted RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 A0A0G2JND7 137 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 OGTO15294 1046 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 TSHRP16473 764 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 PPIBP23284 216 aaKnown RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 ADSLP30566 484 aaPredicted RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 LSP1P33241 339 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 HIST2H2ACQ16777 129 aaPredicted RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 UAP1L1Q3KQV9 507 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 SV2CQ496J9 727 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 NAIF1Q69YI7 327 aaPredicted RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 HIST2H2AA3Q6FI13 130 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 FAM45BPQ6NSW5 357 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 TTC7BQ86TV6 843 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 CROCCP3Q8IVE0 287 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 PPM1NQ8N819 430 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 FBXO27Q8NI29 283 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 KCNE4Q8WWG9 221 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 HAVCR1Q96D42 359 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 TMEM176AQ96HP8 235 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 FEM1CQ96JP0 617 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 COPS4Q9BT78 406 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 EFCAB1Q9HAE3 211 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 FBRSQ9HAH7 460 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 PRMT7Q9NVM4 692 aaPredicted RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 SH3BP4Q9P0V3 963 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 WDR27A2RRH5 827 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 BLACEA4D250 179 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 MFSD11O43934 449 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 GPC4O75487 556 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 ALBP02768 609 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 DDX6P26196 483 aaKnown RBP eCLIP3.39□□□□□ -1.87
CHD9-213ENST00000564845 RAB25P57735 213 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 HPCAP84074 193 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 SLC39A12Q504Y0 691 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 TIGD5Q53EQ6 642 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 HEATR6Q6AI08 1181 aaKnown RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 KIAA1841Q6NSI8 718 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 TMC5Q6UXY8 1006 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 RTN4RL1Q86UN2 441 aaPredicted RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 ALYREFQ86V81 257 aaKnown RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 RASAL3Q86YV0 1011 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 OR52K2Q8NGK3 314 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 ATL1Q8WXF7 558 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 MRI1Q9BV20 369 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 PCBD2Q9H0N5 130 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 CYP4F12Q9HCS2 524 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 RSL24D1Q9UHA3 163 aaKnown RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 SHOC2Q9UQ13 582 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 TNPO3Q9Y5L0 923 aaKnown RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 TRPC5OSA6NMA1 111 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 C2orf81A6NN90 581 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 TBC1D4O60343 1298 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 CCNDBP1O95273 360 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 CBX6O95503 412 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 RPP38P78345 283 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 SULT2A1Q06520 285 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 MGAT5Q09328 741 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 EFHC1Q5JVL4 640 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 HHATQ5VTY9 493 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 AGMOQ6ZNB7 445 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms