RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 SEMA3CQ99985 751 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 MGME1Q9BQP7 344 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 MIR1-1HGQ9H1L0 117 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 C6orf106Q9H6K1 298 aaPredicted RBP16.16■□□□□ 0.18
RAB40C-208ENST00000564703 PREBQ9HCU5 417 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 DKK3Q9UBP4 350 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 WDFY4Q6ZS81 3184 aa16.16■□□□□ 0.18
RAB40C-208ENST00000564703 NUMA1Q14980 2115 aa16.15■□□□□ 0.18
RAB40C-208ENST00000564703 A0A1W2PQ67 120 aa16.15■□□□□ 0.18
RAB40C-208ENST00000564703 KCNK3O14649 394 aa16.15■□□□□ 0.18
RAB40C-208ENST00000564703 MUSKO15146 869 aa16.15■□□□□ 0.18
RAB40C-208ENST00000564703 PIGNO95427 931 aa16.15■□□□□ 0.18
RAB40C-208ENST00000564703 PECAM1P16284 738 aaPredicted RBP16.15■□□□□ 0.18
RAB40C-208ENST00000564703 ITPKAP23677 461 aa16.15■□□□□ 0.18
RAB40C-208ENST00000564703 NFKBIAP25963 317 aa16.15■□□□□ 0.18
RAB40C-208ENST00000564703 SUOXP51687 545 aa16.15■□□□□ 0.18
RAB40C-208ENST00000564703 IFI35P80217 286 aaPredicted RBP16.15■□□□□ 0.18
RAB40C-208ENST00000564703 AGBL4Q5VU57 503 aa16.15■□□□□ 0.18
RAB40C-208ENST00000564703 RALGAPA1Q6GYQ0 2036 aa16.15■□□□□ 0.18
RAB40C-208ENST00000564703 AADACL2Q6P093 401 aa16.15■□□□□ 0.18
RAB40C-208ENST00000564703 DARS2Q6PI48 645 aaKnown RBP16.15■□□□□ 0.18
RAB40C-208ENST00000564703 BRAT1Q6PJG6 821 aa16.15■□□□□ 0.18
RAB40C-208ENST00000564703 SLC41A1Q8IVJ1 513 aa16.15■□□□□ 0.18
RAB40C-208ENST00000564703 NDUFAF2Q8N183 169 aa16.15■□□□□ 0.18
RAB40C-208ENST00000564703 PGBD5Q8N414 524 aa16.15■□□□□ 0.18
RAB40C-208ENST00000564703 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.15■□□□□ 0.18
RAB40C-208ENST00000564703 ACTL9Q8TC94 416 aa16.15■□□□□ 0.18
RAB40C-208ENST00000564703 PDCD6IPQ8WUM4 868 aaKnown RBP16.15■□□□□ 0.18
RAB40C-208ENST00000564703 NOD2Q9HC29 1040 aa16.15■□□□□ 0.18
RAB40C-208ENST00000564703 SUSD2Q9UGT4 822 aa16.15■□□□□ 0.18
RAB40C-208ENST00000564703 JRKLQ9Y4A0 524 aa16.15■□□□□ 0.18
RAB40C-208ENST00000564703 TTC24A2A3L6 582 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-208ENST00000564703 TSPAN6O43657 245 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 LRP3O75074 770 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 ZNF189O75820 626 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-208ENST00000564703 SERPINF2P08697 491 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 CA4P22748 312 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 MAOBP27338 520 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 MPLP40238 635 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 CCR5P51681 352 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 EIF3EP60228 445 aaKnown RBP16.14■□□□□ 0.17
RAB40C-208ENST00000564703 OTUD4Q01804 1114 aaKnown RBP16.14■□□□□ 0.17
RAB40C-208ENST00000564703 SPEM2Q0P670 501 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 ELP6Q0PNE2 266 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 NOMO1Q15155 1222 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 TEX44Q53QW1 395 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 PIP5KL1Q5T9C9 394 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 ERAP2Q6P179 960 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 B4GALNT4Q76KP1 1039 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 PARS2Q7L3T8 475 aaKnown RBP16.14■□□□□ 0.17
RAB40C-208ENST00000564703 PID1Q7Z2X4 250 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 ALYREFQ86V81 257 aaKnown RBP16.14■□□□□ 0.17
RAB40C-208ENST00000564703 CEP76Q8TAP6 659 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 BIRC7Q96CA5 298 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 AGAP3Q96P47 875 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 VAT1Q99536 393 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 IL12RB2Q99665 862 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 CARD9Q9H257 536 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 VPS45Q9NRW7 570 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 EIF2B4Q9UI10 523 aaKnown RBP16.14■□□□□ 0.17
RAB40C-208ENST00000564703 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-208ENST00000564703 PCDHGC4Q9Y5F7 938 aa16.14■□□□□ 0.17
RAB40C-208ENST00000564703 PRR5-ARHGAP8B1AHC4 643 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 RNF103O00237 685 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 KHNYNO15037 678 aaKnown RBP16.13■□□□□ 0.17
RAB40C-208ENST00000564703 AP1G1O43747 822 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 FOXD2O60548 495 aaPredicted RBP16.13■□□□□ 0.17
RAB40C-208ENST00000564703 RNGTTO60942 597 aaKnown RBP16.13■□□□□ 0.17
RAB40C-208ENST00000564703 STK10O94804 968 aaKnown RBP16.13■□□□□ 0.17
RAB40C-208ENST00000564703 RBP3P10745 1247 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 TIMP2P16035 220 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 CR2P20023 1033 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 CD27P26842 260 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 HOXD12P35452 270 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 NUDT1P36639 197 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 SGCGQ13326 291 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 PRKD1Q15139 912 aaPredicted RBP16.13■□□□□ 0.17
RAB40C-208ENST00000564703 UGP2Q16851 508 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 DUOXA1Q1HG43 343 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 SLC45A4Q5BKX6 768 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 CDKL3Q8IVW4 592 aaPredicted RBP16.13■□□□□ 0.17
RAB40C-208ENST00000564703 DCLK2Q8N568 766 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 MAIP1Q8WWC4 291 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 HTR3CQ8WXA8 447 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 DNASE2BQ8WZ79 361 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 FAM131CQ96AQ9 280 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 PILRBQ9UKJ0 227 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 ATP8A1Q9Y2Q0 1164 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 FADS3Q9Y5Q0 445 aa16.13■□□□□ 0.17
RAB40C-208ENST00000564703 CEP104O60308 925 aa16.12■□□□□ 0.17
RAB40C-208ENST00000564703 SOCS5O75159 536 aa16.12■□□□□ 0.17
RAB40C-208ENST00000564703 HLA-DQB2P05538 268 aa16.12■□□□□ 0.17
RAB40C-208ENST00000564703 MAT2AP31153 395 aaKnown RBP16.12■□□□□ 0.17
RAB40C-208ENST00000564703 TAS2R38P59533 333 aa16.12■□□□□ 0.17
RAB40C-208ENST00000564703 RPS21P63220 83 aaKnown RBP16.12■□□□□ 0.17
RAB40C-208ENST00000564703 FAM193AP78312 1265 aa16.12■□□□□ 0.17
RAB40C-208ENST00000564703 DSC2Q02487 901 aa16.12■□□□□ 0.17
RAB40C-208ENST00000564703 ARMC12Q5T9G4 340 aa16.12■□□□□ 0.17
RAB40C-208ENST00000564703 ZSCAN30Q86W11 494 aa16.12■□□□□ 0.17
RAB40C-208ENST00000564703 TRIM69Q86WT6 500 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms