RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 RTP4Q96DX8 246 aa11.19□□□□□ -0.62
TCF4-222ENST00000564228 CTRCQ99895 268 aa11.19□□□□□ -0.62
TCF4-222ENST00000564228 NPLQ9BXD5 320 aaPredicted RBP11.19□□□□□ -0.62
TCF4-222ENST00000564228 MROQ9BYG7 248 aa11.19□□□□□ -0.62
TCF4-222ENST00000564228 ZNF518BQ9C0D4 1074 aa11.19□□□□□ -0.62
TCF4-222ENST00000564228 ARMC7Q9H6L4 198 aa11.19□□□□□ -0.62
TCF4-222ENST00000564228 PARVBQ9HBI1 364 aa11.19□□□□□ -0.62
TCF4-222ENST00000564228 RIC8BQ9NVN3 520 aa11.19□□□□□ -0.62
TCF4-222ENST00000564228 MIOSQ9NXC5 875 aa11.19□□□□□ -0.62
TCF4-222ENST00000564228 SAE1Q9UBE0 346 aaPredicted RBP11.19□□□□□ -0.62
TCF4-222ENST00000564228 CACNG4Q9UBN1 327 aa11.19□□□□□ -0.62
TCF4-222ENST00000564228 SUCOQ9UBS9 1254 aaKnown RBP11.19□□□□□ -0.62
TCF4-222ENST00000564228 CDC14AQ9UNH5 594 aa11.19□□□□□ -0.62
TCF4-222ENST00000564228 PCDHB4Q9Y5E5 795 aa11.19□□□□□ -0.62
TCF4-222ENST00000564228 SNX9Q9Y5X1 595 aa11.19□□□□□ -0.62
TCF4-222ENST00000564228 FAM47E-STBD1D6RA91 191 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 NOL3O60936 208 aaKnown RBP11.18□□□□□ -0.62
TCF4-222ENST00000564228 H2AFYO75367 372 aaKnown RBP11.18□□□□□ -0.62
TCF4-222ENST00000564228 THP07101 528 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 RALBP11234 206 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 MX2P20592 715 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 MYF6P23409 242 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 ATICP31939 592 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 MAGEA3P43357 314 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 GSSP48637 474 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 HNRNPFP52597 415 aaKnown RBP11.18□□□□□ -0.62
TCF4-222ENST00000564228 OXA1LQ15070 435 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 NOMO1Q15155 1222 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 NRF1Q16656 503 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 PHKG1Q16816 387 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 TCTN1Q2MV58 587 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 NHSL2Q5HYW2 709 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 AARS2Q5JTZ9 985 aaKnown RBP11.18□□□□□ -0.62
TCF4-222ENST00000564228 MFSD4BQ5TF39 518 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 VWA5B1Q5TIE3 1220 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 C9orf57Q5W0N0 161 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 PPP4R4Q6NUP7 873 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 C4orf22Q6V702 233 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 UNC5AQ6ZN44 842 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 CAND1Q86VP6 1230 aaKnown RBP11.18□□□□□ -0.62
TCF4-222ENST00000564228 TTC30AQ86WT1 665 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 ARL10Q8N8L6 244 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 ANKFN1Q8N957 763 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 MFSD2AQ8NA29 543 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 GRIN3AQ8TCU5 1115 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 FNIP1Q8TF40 1166 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 ASB9Q96DX5 294 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 NSMCE3Q96MG7 304 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 COG4Q9H9E3 785 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 WDR41Q9HAD4 459 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 PRDM16Q9HAZ2 1276 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 COPG2Q9UBF2 871 aa11.18□□□□□ -0.62
TCF4-222ENST00000564228 FNDC1Q4ZHG4 1894 aaPredicted RBP11.17□□□□□ -0.62
TCF4-222ENST00000564228 KRBA1A5PL33 1030 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 GPR37O15354 613 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 GNL1P36915 607 aaPredicted RBP11.17□□□□□ -0.62
TCF4-222ENST00000564228 ZNF132P52740 706 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 CDH8P55286 799 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 CDH15P55291 814 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 ARPC4P59998 168 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 TRAP1Q12931 704 aaKnown RBP11.17□□□□□ -0.62
TCF4-222ENST00000564228 TRIM16LQ309B1 348 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 ZNF394Q53GI3 561 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 ZNF598Q86UK7 904 aaKnown RBP11.17□□□□□ -0.62
TCF4-222ENST00000564228 C10orf107Q8IVU9 208 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 TAB3Q8N5C8 712 aaPredicted RBP11.17□□□□□ -0.62
TCF4-222ENST00000564228 CNTD1Q8N815 330 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 DEPDC1BQ8WUY9 529 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 TFAP2CQ92754 450 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 TAMM41Q96BW9 452 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 ZNF385DQ9H6B1 395 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 VRTNQ9H8Y1 702 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 EFCAB1Q9HAE3 211 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 TCF7L2Q9NQB0 619 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 CISHQ9NSE2 258 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 ERVK-11Q9UQG0 969 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 PCDHA11Q9Y5I1 949 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 A0A1W2PPW3 197 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 DYTNA2CJ06 578 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 CASTOR2A6NHX0 329 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 ENPP3O14638 875 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 AKAP10O43572 662 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 KDM1AO60341 852 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 KLHL41O60662 606 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 AVILO75366 819 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 PARNO95453 639 aaKnown RBP11.17□□□□□ -0.62
TCF4-222ENST00000564228 ERBB2P04626 1255 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 P4HA1P13674 534 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 SLC7A1P30825 629 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 ARRB2P32121 409 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 CDH5P33151 784 aaPredicted RBP11.17□□□□□ -0.62
TCF4-222ENST00000564228 RHDQ02161 417 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 LSM12Q3MHD2 195 aaKnown RBP11.17□□□□□ -0.62
TCF4-222ENST00000564228 DARS2Q6PI48 645 aaKnown RBP11.17□□□□□ -0.62
TCF4-222ENST00000564228 XKR5Q6UX68 686 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 ATG14Q6ZNE5 492 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 RFX6Q8HWS3 928 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 FAM47BQ8NA70 645 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 TMEM35BQ8NCS4 154 aa11.17□□□□□ -0.62
TCF4-222ENST00000564228 SPATA18Q8TC71 538 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms