RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 BOCQ9BWV1 1114 aa21.17■□□□□ 0.98
HERC2-204ENST00000563945 SETXQ7Z333 2677 aaKnown RBP21.17■□□□□ 0.98
HERC2-204ENST00000563945 F8VZ95 297 aa21.16■□□□□ 0.98
HERC2-204ENST00000563945 GCATO75600 419 aa21.16■□□□□ 0.98
HERC2-204ENST00000563945 LRIG2O94898 1065 aa21.16■□□□□ 0.98
HERC2-204ENST00000563945 TNFSF15O95150 251 aa21.16■□□□□ 0.98
HERC2-204ENST00000563945 MLLT3P42568 568 aaPredicted RBP21.16■□□□□ 0.98
HERC2-204ENST00000563945 RHOAP61586 193 aa21.16■□□□□ 0.98
HERC2-204ENST00000563945 ELOCQ15369 112 aa21.16■□□□□ 0.98
HERC2-204ENST00000563945 CCDC14Q49A88 953 aa21.16■□□□□ 0.98
HERC2-204ENST00000563945 LRRC73Q5JTD7 316 aa21.16■□□□□ 0.98
HERC2-204ENST00000563945 ARTNQ5T4W7 220 aa21.16■□□□□ 0.98
HERC2-204ENST00000563945 PCSK4Q6UW60 755 aa21.16■□□□□ 0.98
HERC2-204ENST00000563945 MACC1Q6ZN28 852 aa21.16■□□□□ 0.98
HERC2-204ENST00000563945 CCDC81Q6ZN84 652 aa21.16■□□□□ 0.98
HERC2-204ENST00000563945 STRADAQ7RTN6 431 aa21.16■□□□□ 0.98
HERC2-204ENST00000563945 NLRP14Q86W24 1093 aa21.16■□□□□ 0.98
HERC2-204ENST00000563945 SLC35F3Q8IY50 421 aa21.16■□□□□ 0.98
HERC2-204ENST00000563945 CASKIN2Q8WXE0 1202 aa21.16■□□□□ 0.98
HERC2-204ENST00000563945 NCAPGQ9BPX3 1015 aa21.16■□□□□ 0.98
HERC2-204ENST00000563945 CCDC3Q9BQI4 270 aa21.16■□□□□ 0.98
HERC2-204ENST00000563945 NAA15Q9BXJ9 866 aaKnown RBP21.16■□□□□ 0.98
HERC2-204ENST00000563945 TTYH3Q9C0H2 523 aa21.16■□□□□ 0.98
HERC2-204ENST00000563945 TCEAL2Q9H3H9 227 aaPredicted RBP21.16■□□□□ 0.98
HERC2-204ENST00000563945 CCDC187A0A096LP49 1063 aa21.15■□□□□ 0.98
HERC2-204ENST00000563945 TMEM110-MUSTN1A8MSY1 372 aa21.15■□□□□ 0.98
HERC2-204ENST00000563945 AREL1O15033 823 aa21.15■□□□□ 0.98
HERC2-204ENST00000563945 YY2O15391 372 aa21.15■□□□□ 0.98
HERC2-204ENST00000563945 GFPT2O94808 682 aa21.15■□□□□ 0.98
HERC2-204ENST00000563945 TPM2P07951 284 aa21.15■□□□□ 0.98
HERC2-204ENST00000563945 ALPIP09923 528 aa21.15■□□□□ 0.98
HERC2-204ENST00000563945 TSHRP16473 764 aa21.15■□□□□ 0.98
HERC2-204ENST00000563945 MMP8P22894 467 aa21.15■□□□□ 0.98
HERC2-204ENST00000563945 HTR1BP28222 390 aa21.15■□□□□ 0.98
HERC2-204ENST00000563945 IGFALSP35858 605 aa21.15■□□□□ 0.98
HERC2-204ENST00000563945 CDR2Q01850 454 aa21.15■□□□□ 0.98
HERC2-204ENST00000563945 KLHL40Q2TBA0 621 aa21.15■□□□□ 0.98
HERC2-204ENST00000563945 MANEALQ5VSG8 457 aa21.15■□□□□ 0.98
HERC2-204ENST00000563945 FSTL5Q8N475 847 aaPredicted RBP21.15■□□□□ 0.98
HERC2-204ENST00000563945 GPT2Q8TD30 523 aa21.15■□□□□ 0.98
HERC2-204ENST00000563945 EPAS1Q99814 870 aa21.15■□□□□ 0.98
HERC2-204ENST00000563945 C11orf70Q9BRQ4 267 aa21.15■□□□□ 0.98
HERC2-204ENST00000563945 WRAP53Q9BUR4 548 aaKnown RBP21.15■□□□□ 0.98
HERC2-204ENST00000563945 LRRC61Q9BV99 259 aa21.15■□□□□ 0.98
HERC2-204ENST00000563945 FAM72CH0Y354 149 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 TMX2-CTNND1H3BSU7 103 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 TMCC1O94876 653 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 KRT3P12035 628 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 PTPN9P43378 593 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 ELP6Q0PNE2 266 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 ZSCAN23Q3MJ62 389 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 RAB6CQ53S08 254 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 CFAP58Q5T655 872 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 FAM72AQ5TYM5 149 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 FAM72DQ6L9T8 149 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 TRIM72Q6ZMU5 477 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 SLFN11Q7Z7L1 901 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 FAM72BQ86X60 149 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 HID1Q8IV36 788 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 ATL2Q8NHH9 583 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 SLC30A5Q8TAD4 765 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 FAM172AQ8WUF8 416 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 SLC20A1Q8WUM9 679 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 SELENOOQ9BVL4 669 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 RAB6CQ9H0N0 254 aa21.14■□□□□ 0.97
HERC2-204ENST00000563945 ANKRD62A6NC57 917 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 C2CD4BA6NLJ0 364 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 CYP1A1P04798 512 aaPredicted RBP21.13■□□□□ 0.97
HERC2-204ENST00000563945 TIMP2P16035 220 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 EEF1GP26641 437 aaKnown RBP21.13■□□□□ 0.97
HERC2-204ENST00000563945 EPHB2P29323 1055 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 NSFP46459 744 aaKnown RBP21.13■□□□□ 0.97
HERC2-204ENST00000563945 PEX5P50542 639 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 SUOXP51687 545 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 LY6DQ14210 128 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 LRRC14Q15048 493 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 SYCP1Q15431 976 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 DPCR1Q3MIW9 517 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 INO80DQ53TQ3 878 aaPredicted RBP21.13■□□□□ 0.97
HERC2-204ENST00000563945 EFHC2Q5JST6 749 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 SCYL2Q6P3W7 929 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 LVRNQ6Q4G3 990 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 RD3Q7Z3Z2 195 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 GKN2Q86XP6 184 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 JOSD2Q8TAC2 188 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 GFM1Q96RP9 751 aaKnown RBP21.13■□□□□ 0.97
HERC2-204ENST00000563945 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.13■□□□□ 0.97
HERC2-204ENST00000563945 STRADBQ9C0K7 418 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 MBNL1Q9NR56 388 aaKnown RBP21.13■□□□□ 0.97
HERC2-204ENST00000563945 SAMSN1Q9NSI8 373 aaKnown RBP21.13■□□□□ 0.97
HERC2-204ENST00000563945 SIRPGQ9P1W8 387 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 DKK3Q9UBP4 350 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 RP1P56715 2156 aa21.13■□□□□ 0.97
HERC2-204ENST00000563945 K7ENP7 123 aa21.12■□□□□ 0.97
HERC2-204ENST00000563945 RASGRP1O95267 797 aa21.12■□□□□ 0.97
HERC2-204ENST00000563945 C6P13671 934 aa21.12■□□□□ 0.97
HERC2-204ENST00000563945 GPD1P21695 349 aa21.12■□□□□ 0.97
HERC2-204ENST00000563945 YBEYP58557 167 aaPredicted RBP21.12■□□□□ 0.97
HERC2-204ENST00000563945 POLR2FP61218 127 aaKnown RBP21.12■□□□□ 0.97
HERC2-204ENST00000563945 TCP11X2Q5H9J9 407 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms