RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 PSMC3P17980 439 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 CDK9P50750 372 aaKnown RBP10.55□□□□□ -0.72
RNF40-204ENST00000563683 SGO1Q5FBB7 561 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 GRAMD4Q6IC98 578 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 ANKRD23Q86SG2 305 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 CAND1Q86VP6 1230 aaKnown RBP10.55□□□□□ -0.72
RNF40-204ENST00000563683 DLG3Q92796 817 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 VPS50Q96JG6 964 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 CCDC138Q96M89 665 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 PPP1R2P1Q96PQ5 205 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 PIF1Q9H611 641 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 CAAP1Q9H8G2 361 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 ABCC13Q9NSE7 274 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 FBXO5Q9UKT4 447 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 FZD10Q9ULW2 581 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 GNEQ9Y223 722 aaKnown RBP10.55□□□□□ -0.72
RNF40-204ENST00000563683 IGKV6-21A0A0C4DH24 114 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 SH3PXD2BA1X283 911 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 TK2O00142 265 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 CBX4O00257 560 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 H2AFYO75367 372 aaKnown RBP10.55□□□□□ -0.72
RNF40-204ENST00000563683 RBP1P09455 135 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 MPSTP25325 297 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 PPARGP37231 505 aaPredicted RBP10.55□□□□□ -0.72
RNF40-204ENST00000563683 MYBPC1Q00872 1141 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 INCA1Q0VD86 236 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 NAB1Q13506 487 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 TUBB3Q13509 450 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 SPIDRQ14159 915 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 FAM187BQ17R55 369 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 FAM110CQ1W6H9 321 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 DUS1LQ6P1R4 473 aaKnown RBP10.55□□□□□ -0.72
RNF40-204ENST00000563683 LZTR1Q8N653 840 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 CINPQ9BW66 212 aaPredicted RBP10.55□□□□□ -0.72
RNF40-204ENST00000563683 TRIM15Q9C019 465 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 COPS7BQ9H9Q2 264 aaPredicted RBP10.55□□□□□ -0.72
RNF40-204ENST00000563683 FAM50BQ9Y247 325 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 CEPT1Q9Y6K0 416 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 MYH9P35579 1960 aaKnown RBP10.55□□□□□ -0.72
RNF40-204ENST00000563683 F5H5T6 163 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 SLCO1B7G3V0H7 640 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 H3BSA7 217 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 CCL22O00626 93 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 HDAC3O15379 428 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 PTPN3P26045 913 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 GRM3Q14832 879 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 POLD3Q15054 466 aaPredicted RBP10.55□□□□□ -0.72
RNF40-204ENST00000563683 CCDC92Q53HC0 331 aaPredicted RBP10.55□□□□□ -0.72
RNF40-204ENST00000563683 RAP1GAP2Q684P5 730 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 LPCAT2Q7L5N7 544 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 TSPAN14Q8NG11 270 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 GIPC2Q8TF65 315 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 SIGLEC10Q96LC7 697 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 SERPINB11Q96P15 392 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 GPR63Q9BZJ6 419 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 C20orf27Q9GZN8 174 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 ALG9Q9H6U8 611 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 ENTPD7Q9NQZ7 604 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 RGS18Q9NS28 235 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 TBC1D13Q9NVG8 400 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 RNF112Q9ULX5 631 aa10.55□□□□□ -0.72
RNF40-204ENST00000563683 GREB1LQ9C091 1923 aaPredicted RBP10.55□□□□□ -0.72
RNF40-204ENST00000563683 ZNFX1Q9P2E3 1918 aaKnown RBP10.55□□□□□ -0.72
RNF40-204ENST00000563683 HEATR9A2RTY3 570 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 NR5A2O00482 541 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 ITM2AO43736 263 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 PAGE1O75459 146 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 PORP16435 677 aaPredicted RBP10.54□□□□□ -0.72
RNF40-204ENST00000563683 IDH3AP50213 366 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 SEMA5AQ13591 1074 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 PCBP1Q15365 356 aaKnown RBP eCLIP10.54□□□□□ -0.722e-8■■■■■ 47.3
RNF40-204ENST00000563683 CCL14Q16627 93 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 RNF180Q86T96 592 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 SCAMP5Q8TAC9 235 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 BRI3BPQ8WY22 251 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 HSPBAP1Q96EW2 488 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 ZBTB18Q99592 522 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 C16orf70Q9BSU1 422 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 ING2Q9H160 280 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 TBC1D23Q9NUY8 699 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 SLC27A5Q9Y2P5 690 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 E2F6O75461 281 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 AP2A1O95782 977 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 NMBRP28336 390 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 GMPRP36959 345 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 MAGEA10P43363 369 aaPredicted RBP10.54□□□□□ -0.72
RNF40-204ENST00000563683 CDH13P55290 713 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 FCGRTP55899 365 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 DAOAP59103 153 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 PHEXP78562 749 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 SLC10A2Q12908 348 aaPredicted RBP10.54□□□□□ -0.72
RNF40-204ENST00000563683 CBLBQ13191 982 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 ZNF460Q14592 562 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 TEDDM1Q5T9Z0 273 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 TIFABQ6ZNK6 161 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 CLEC20AQ6ZU45 233 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 LDB1Q86U70 411 aaPredicted RBP10.54□□□□□ -0.72
RNF40-204ENST00000563683 ZNF781Q8N8C0 355 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 SHKBP1Q8TBC3 707 aa10.54□□□□□ -0.72
RNF40-204ENST00000563683 CCDC126Q96EE4 140 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms