RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 POC1AQ8NBT0 407 aa3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 ZMIZ2Q8NF64 920 aa3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 HSPH1Q92598 858 aa3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 SDCCAG3Q96C92 435 aa3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 SPRY4Q9C004 299 aa3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 SDF2L1Q9HCN8 221 aa3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 ENTPD7Q9NQZ7 604 aa3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 ANKRD10Q9NXR5 420 aa3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 MAGEA13PA6NCF6 341 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 ERVV-2B6SEH9 535 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 SOCS5O75159 536 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 IGHV4-30-4P0DP06 118 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 TFPIP10646 304 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 RXRAP19793 462 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 LIFRP42702 1097 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 ACTR2P61160 394 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 ACSM2AQ08AH3 577 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 PRKG1Q13976 671 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 SLC18A3Q16572 532 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 DENND1BQ6P3S1 775 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 KLHL24Q6TFL4 600 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 MOGAT3Q86VF5 341 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 CHD1LQ86WJ1 897 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 SFTPA2Q8IWL1 248 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 NAGSQ8N159 534 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 MYCT1Q8N699 235 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 NEK9Q8TD19 979 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 TRAPPC12Q8WVT3 735 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 SORCS1Q8WY21 1168 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 MPHOSPH6Q99547 160 aaKnown RBP3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 SPATS2LQ9NUQ6 558 aaKnown RBP3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 KIF17Q9P2E2 1029 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 IFT80Q9P2H3 777 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 FEM1BQ9UK73 627 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 DNAJC16Q9Y2G8 782 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 PAM16Q9Y3D7 125 aa3.41□□□□□ -1.86
HMGB1P33-201ENST00000563485 hDV102S1A0JD36 115 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 B9A039 149 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 ATP2C2O75185 946 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 DHRS4L1P0CG22 281 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 PIGAP37287 484 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 CXCR3P49682 368 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 MORC3Q14149 939 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 CALCRLQ16602 461 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 CTXN3Q4LDR2 81 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 DSTYKQ6XUX3 929 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 SMIM29Q86T20 159 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 LURAP1LQ8IV03 231 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 FOXP4Q8IVH2 680 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 TMEM57Q8N5G2 664 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 CEP70Q8NHQ1 597 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 GDPD5Q8WTR4 605 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 TMEM170AQ8WVE7 144 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 SECTM1Q8WVN6 248 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 MTBPQ96DY7 904 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 HES6Q96HZ4 224 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 LRFN5Q96NI6 719 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 CLSTN3Q9BQT9 956 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 FAM167BQ9BTA0 163 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 PAGR1Q9BTK6 254 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 LMAN2LQ9H0V9 348 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 NOX4Q9NPH5 578 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 SLC9A2Q9UBY0 812 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 NDRG3Q9UGV2 375 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 RRP7AQ9Y3A4 280 aaKnown RBP3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 ADGRF5Q8IZF2 1346 aa3.4□□□□□ -1.87
HMGB1P33-201ENST00000563485 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 EBAG9O00559 213 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 XPNPEP2O43895 674 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 RGS11O94810 467 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 KDM4BO94953 1096 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 PMS2P2O95744 297 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 SP1P08047 785 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 AMD1P17707 334 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 SRD5A1P18405 259 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 ARL16Q0P5N6 197 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 CES5AQ6NT32 575 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 IL20RBQ6UXL0 311 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 C9orf139Q6ZV77 190 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 NEK10Q6ZWH5 1172 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 SHFQ7M4L6 423 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 PRSS45Q7RTY3 260 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 EXOC3L1Q86VI1 746 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 OR1F2PQ96R84 312 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 CSF3RQ99062 836 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 SLC32A1Q9H598 525 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 STN1Q9H668 368 aaKnown RBP3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 CYSLTR2Q9NS75 346 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 GDAQ9Y2T3 454 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 RIPOR2Q9Y4F9 1068 aa3.39□□□□□ -1.87
HMGB1P33-201ENST00000563485 CCDC194A0A1B0GVG4 234 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 TYW5A2RUC4 315 aaKnown RBP3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 CPED1A4D0V7 1026 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 PRR23AA6NEV1 266 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 CBY3A6NI87 242 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 HNRNPCL2B2RXH8 293 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 HSPA12AO43301 675 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 ANP32CO43423 234 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 CEP104O60308 925 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 LMX1BO60663 402 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms