RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 DIO1P49895 249 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 HK2P52789 917 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 CAPZA1P52907 286 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 PTTG1IPP53801 180 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 CTSWP56202 376 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 MXRA7P84157 204 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 DEUP1Q05D60 604 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 NFATC3Q12968 1075 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 BNIP3Q12983 259 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 KCNJ12Q14500 433 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 SSPNQ14714 243 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 PPP1R7Q15435 360 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 INAQ16352 499 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 HLFQ16534 295 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 C19orf54Q5BKX5 351 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 IGSF11Q5DX21 431 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 TPGS2Q68CL5 300 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 RBPMS2Q6ZRY4 209 aaKnown RBP5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 SEM1Q6ZVN7 128 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 INTS8Q75QN2 995 aaKnown RBP5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 ERN2Q76MJ5 926 aaKnown RBP5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 RHPN2Q8IUC4 686 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 ARHGAP12Q8IWW6 846 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 C16orf71Q8IYS4 520 aaPredicted RBP5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 KDM1BQ8NB78 822 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 KIAA1524Q8TCG1 905 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 SLC5A11Q8WWX8 675 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 ZKSCAN4Q969J2 545 aaPredicted RBP5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 UBE2FQ969M7 185 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 KLHL29Q96CT2 875 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 DTNBP1Q96EV8 351 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 FAM89AQ96GI7 184 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 MGME1Q9BQP7 344 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 MESP1Q9BRJ9 268 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 PIMREGQ9BSJ6 248 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 SPATA5L1Q9BVQ7 753 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 HEMGNQ9BXL5 484 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 MTMR12Q9C0I1 747 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 TINAGL1Q9GZM7 467 aaPredicted RBP5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 CTDSP1Q9GZU7 261 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 OR10A5Q9H207 317 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 POLE3Q9NRF9 147 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 SOHLH2Q9NX45 425 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 SEC63Q9UGP8 760 aaKnown RBP5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 SLC23A1Q9UHI7 598 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 OSGIN1Q9UJX0 560 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 CHKBQ9Y259 395 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 ASB3Q9Y575 518 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 RIC1Q4ADV7 1423 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 CICQ96RK0 1608 aaPredicted RBP5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 TEX13CA0A0J9YWL9 993 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 FADS2P1A8MWK0 482 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 KPNA7A9QM74 516 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 H0YCG3 227 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 H3BS24 57 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 IFNL4K9M1U5 179 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 LIASO43766 372 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 CEP104O60308 925 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 SLC43A1O75387 559 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 ITGA10O75578 1167 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 CIAO1O76071 339 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 CFIP05156 583 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 FYNP06241 537 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 PRG2P13727 222 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 ERCC2P18074 760 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 ENDOUP21128 410 aaKnown RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 SKIV2L2P42285 1042 aaKnown RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 MTIF2P46199 727 aaKnown RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 KCNJ1P48048 391 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 DHPSP49366 369 aaPredicted RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 TIRAPP58753 221 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 COG7P83436 770 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 ELP6Q0PNE2 266 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 CETN1Q12798 172 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 KIF5AQ12840 1032 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 BAATQ14032 418 aaPredicted RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 FRG1Q14331 258 aaKnown RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 CSHL1Q14406 222 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 ZNF273Q14593 569 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 MVPQ14764 893 aaKnown RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 KIR3DS1Q14943 382 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 INSCQ1MX18 579 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 P3H1Q32P28 736 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 ZIK1Q3SY52 487 aaPredicted RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 ZNF569Q5MCW4 686 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 MFSD14BQ5SR56 506 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 ARHGAP40Q5TG30 622 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 KIAA1324Q6UXG2 1013 aaKnown RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 ZYG11AQ6WRX3 759 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 MSANTD1Q6ZTZ1 278 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 C15orf52Q6ZUT6 534 aaKnown RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 SPATA19Q7Z5L4 167 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 SPRED2Q7Z698 418 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 AACSQ86V21 672 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 POU5F2Q8N7G0 328 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 XXYLT1Q8NBI6 393 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 ATAD1Q8NBU5 361 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 DNERQ8NFT8 737 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 OR56B2PQ8NGI1 322 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms