RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 YBX2Q9Y2T7 364 aaKnown RBP9.83□□□□□ -0.84
UBFD1-202ENST00000563366 F5H423 210 aaPredicted RBP9.82□□□□□ -0.84
UBFD1-202ENST00000563366 CBX4O00257 560 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 TSPAN3O60637 253 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 KRT38O76015 456 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 ALDH1A2O94788 518 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 ARHGEF15O94989 841 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 EPOP01588 193 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 HLA-DPA1P20036 260 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 MGAT1P26572 445 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 ACVRL1P37023 503 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 MAPK8P45983 427 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 SESN2P58004 480 aaPredicted RBP9.82□□□□□ -0.84
UBFD1-202ENST00000563366 ILF2Q12905 390 aaKnown RBP9.82□□□□□ -0.84
UBFD1-202ENST00000563366 CRYMQ14894 314 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 TMED2Q15363 201 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 TEAD2Q15562 447 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 KBTBD12Q3ZCT8 623 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 PCID2Q5JVF3 399 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 PRSS36Q5K4E3 855 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 RNF219Q5W0B1 726 aaPredicted RBP9.82□□□□□ -0.84
UBFD1-202ENST00000563366 ALKBH2Q6NS38 261 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 CXorf57Q6NSI4 855 aaKnown RBP9.82□□□□□ -0.84
UBFD1-202ENST00000563366 RETSATQ6NUM9 610 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 NLRP9Q7RTR0 991 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 OTOP3Q7RTS5 596 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 GRASPQ7Z6J2 395 aaPredicted RBP9.82□□□□□ -0.84
UBFD1-202ENST00000563366 SLC26A11Q86WA9 606 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 SH2D3CQ8N5H7 860 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 PPHLN1Q8NEY8 458 aaKnown RBP9.82□□□□□ -0.84
UBFD1-202ENST00000563366 IPMKQ8NFU5 416 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 OR7D4Q8NG98 312 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 SLC44A1Q8WWI5 657 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 USP13Q92995 863 aaPredicted RBP9.82□□□□□ -0.84
UBFD1-202ENST00000563366 ALKBH8Q96BT7 664 aaKnown RBP9.82□□□□□ -0.84
UBFD1-202ENST00000563366 MRPL38Q96DV4 380 aaKnown RBP9.82□□□□□ -0.84
UBFD1-202ENST00000563366 MGME1Q9BQP7 344 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 DHRS4Q9BTZ2 278 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 SPON2Q9BUD6 331 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 CAPS2Q9BXY5 557 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 NKX2-4Q9H2Z4 354 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 MRM3Q9HC36 420 aaKnown RBP9.82□□□□□ -0.84
UBFD1-202ENST00000563366 SSU72Q9NP77 194 aaKnown RBP9.82□□□□□ -0.84
UBFD1-202ENST00000563366 HCFC1R1Q9NWW0 138 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 SYBUQ9NX95 663 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 KIAA1522Q9P206 1035 aaPredicted RBP9.82□□□□□ -0.84
UBFD1-202ENST00000563366 TXNDC16Q9P2K2 825 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 VPS28Q9UK41 221 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 SOX13Q9UN79 622 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 MRPS23Q9Y3D9 190 aaKnown RBP9.82□□□□□ -0.84
UBFD1-202ENST00000563366 RPS6KL1Q9Y6S9 549 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 C2orf16Q68DN1 1984 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 NOTCH4Q99466 2003 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 ANKRD36A6QL64 1941 aa9.82□□□□□ -0.84
UBFD1-202ENST00000563366 A0A0D9SEW6 157 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 HEATR9A2RTY3 570 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 FAM159BA6NKW6 160 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 SRRM3A6NNA2 597 aaPredicted RBP9.81□□□□□ -0.84
UBFD1-202ENST00000563366 MAN1A2O60476 641 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 MT-CYBP00156 380 aaPredicted RBP9.81□□□□□ -0.84
UBFD1-202ENST00000563366 FGF1P05230 155 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 BMP8BP34820 402 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 ADRA1AP35348 466 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 CCR2P41597 374 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 GRIA1P42261 906 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 NRIP1P48552 1158 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 SLC18A1P54219 525 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 SLC20A2Q08357 652 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 NSUN2Q08J23 767 aaKnown RBP eCLIP9.81□□□□□ -0.84
UBFD1-202ENST00000563366 MTM1Q13496 603 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 DMC1Q14565 340 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 SKIDA1Q1XH10 827 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.81□□□□□ -0.84
UBFD1-202ENST00000563366 UBAP2Q5T6F2 1119 aaKnown RBP9.81□□□□□ -0.84
UBFD1-202ENST00000563366 RNF43Q68DV7 783 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 RANBP10Q6VN20 620 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 MARK2Q7KZI7 788 aaKnown RBP9.81□□□□□ -0.84
UBFD1-202ENST00000563366 RBM23Q86U06 439 aaKnown RBP9.81□□□□□ -0.84
UBFD1-202ENST00000563366 TMEM135Q86UB9 458 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 IGDCC3Q8IVU1 814 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 BBS7Q8IWZ6 715 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 CTAGE3PQ8IX95 158 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 CELF5Q8N6W0 485 aaKnown RBP9.81□□□□□ -0.84
UBFD1-202ENST00000563366 SPATA22Q8NHS9 363 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 FIBINQ8TAL6 211 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 ARNTL2Q8WYA1 636 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 PEX13Q92968 403 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 TADA1Q96BN2 335 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 ZNF707Q96C28 371 aaPredicted RBP9.81□□□□□ -0.84
UBFD1-202ENST00000563366 MYEOVQ96EZ4 313 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 IFT43Q96FT9 208 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 CERS2Q96G23 380 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 FEM1CQ96JP0 617 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 RANBP9Q96S59 729 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 SMC6Q96SB8 1091 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 FEM1AQ9BSK4 669 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 FICDQ9BVA6 458 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 MOCS1Q9NZB8 636 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 UBP1Q9NZI7 540 aa9.81□□□□□ -0.84
UBFD1-202ENST00000563366 ZFATQ9P243 1243 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms