RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 ACVRL1P37023 503 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 PTPN9P43378 593 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 SERPINH1P50454 418 aaKnown RBP10.29□□□□□ -0.76
SNX29-202ENST00000563308 CLCN6P51797 869 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 HDAC4P56524 1084 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 GSCP56915 257 aaPredicted RBP10.29□□□□□ -0.76
SNX29-202ENST00000563308 GNA12Q03113 381 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 BNIP3Q12983 259 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 CLCA4Q14CN2 919 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 CLEC16AQ2KHT3 1053 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 ZNF284Q2VY69 593 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 ARSIQ5FYB1 569 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 SFMBT2Q5VUG0 894 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 CDCP2Q5VXM1 449 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 PRPF39Q86UA1 669 aaKnown RBP10.29□□□□□ -0.76
SNX29-202ENST00000563308 IQCHQ86VS3 1027 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 CCDC185Q8N715 623 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 TMEM145Q8NBT3 493 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 MSANTD4Q8NCY6 345 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 C11orf70Q9BRQ4 267 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 SPON2Q9BUD6 331 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 HDAC8Q9BY41 377 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 CAAP1Q9H8G2 361 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 OR12D3Q9UGF7 316 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 ZFR2Q9UPR6 939 aaKnown RBP10.29□□□□□ -0.76
SNX29-202ENST00000563308 DMTF1Q9Y222 760 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 DAAM1Q9Y4D1 1078 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 PCDHB11Q9Y5F2 797 aa10.29□□□□□ -0.76
SNX29-202ENST00000563308 DOCK4Q8N1I0 1966 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 ARID1BQ8NFD5 2236 aaPredicted RBP10.28□□□□□ -0.76
SNX29-202ENST00000563308 A0A1W2PQU0 124 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 WIPF3A6NGB9 483 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 CDRT15L2A8MXV6 281 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 PRAMEF26H0Y7S4 382 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 KPNA3O00505 521 aaPredicted RBP10.28□□□□□ -0.76
SNX29-202ENST00000563308 LEFTY1O75610 366 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 PRNPP04156 253 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 KRT7P08729 469 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 PRLRP16471 622 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 SDC4P31431 198 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 RFC1P35251 1148 aaPredicted RBP10.28□□□□□ -0.76
SNX29-202ENST00000563308 STAT1P42224 750 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 MYL5Q02045 173 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 SLC20A2Q08357 652 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 OVGP1Q12889 678 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 CDO1Q16878 200 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 ISXQ2M1V0 245 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 TMEM259Q4ZIN3 620 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 SETMARQ53H47 684 aaPredicted RBP10.28□□□□□ -0.76
SNX29-202ENST00000563308 FKBP15Q5T1M5 1219 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 NEK5Q6P3R8 708 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 TRIM72Q6ZMU5 477 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 ERN2Q76MJ5 926 aaKnown RBP10.28□□□□□ -0.76
SNX29-202ENST00000563308 MON1BQ7L1V2 547 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 STRADAQ7RTN6 431 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 PHF13Q86YI8 300 aaPredicted RBP10.28□□□□□ -0.76
SNX29-202ENST00000563308 JAMLQ86YT9 394 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 DRC7Q8IY82 874 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 WDR36Q8NI36 951 aaKnown RBP10.28□□□□□ -0.76
SNX29-202ENST00000563308 C9orf43Q8TAL5 461 aaPredicted RBP10.28□□□□□ -0.76
SNX29-202ENST00000563308 GRIN3AQ8TCU5 1115 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 KLK6Q92876 244 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 ERGIC2Q96RQ1 377 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 CEP44Q9C0F1 390 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 ATP13A1Q9HD20 1204 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 PCDHGA4Q9Y5G9 962 aa10.28□□□□□ -0.76
SNX29-202ENST00000563308 MED13LQ71F56 2210 aa10.27□□□□□ -0.76
SNX29-202ENST00000563308 OTOGQ6ZRI0 2925 aa10.27□□□□□ -0.76
SNX29-202ENST00000563308 DOCK9Q9BZ29 2069 aa10.27□□□□□ -0.76
SNX29-202ENST00000563308 ZFC3H1O60293 1989 aaKnown RBP10.27□□□□□ -0.77
SNX29-202ENST00000563308 CXorf51AA0A1B0GTR3 108 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 SLC31A1O15431 190 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 HNRNPRO43390 633 aaKnown RBP10.27□□□□□ -0.77
SNX29-202ENST00000563308 LRIG2O94898 1065 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 PLEKP08567 350 aaPredicted RBP10.27□□□□□ -0.77
SNX29-202ENST00000563308 KRT3P12035 628 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 ATP1A3P13637 1013 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 RHOQP17081 205 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 GNLYP22749 145 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 ANP32AP39687 249 aaKnown RBP10.27□□□□□ -0.77
SNX29-202ENST00000563308 POLE2P56282 527 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 FGL2Q14314 439 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 ZXDCQ2QGD7 858 aaPredicted RBP10.27□□□□□ -0.77
SNX29-202ENST00000563308 CARD16Q5EG05 197 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 PPP1R15BQ5SWA1 713 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 SEL1L3Q68CR1 1132 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 RETSATQ6NUM9 610 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 WDR59Q6PJI9 974 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 CLEC14AQ86T13 490 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 HORMAD1Q86X24 394 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 SLC25A45Q8N413 288 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 PCDH20Q8N6Y1 951 aaKnown RBP10.27□□□□□ -0.77
SNX29-202ENST00000563308 MAPK15Q8TD08 544 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 FAM172AQ8WUF8 416 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 ARHGEF2Q92974 986 aaKnown RBP10.27□□□□□ -0.77
SNX29-202ENST00000563308 NTAN1Q96AB6 310 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 SYT11Q9BT88 431 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 RETREG1Q9H6L5 497 aa10.27□□□□□ -0.77
SNX29-202ENST00000563308 NOL6Q9H6R4 1146 aaKnown RBP10.27□□□□□ -0.77
SNX29-202ENST00000563308 ZNF71Q9NQZ8 489 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms