RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 RPRD2Q5VT52 1461 aaKnown RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 UGGT1Q9NYU2 1555 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 ADGRF5Q8IZF2 1346 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 KDM3AQ9Y4C1 1321 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 A0A096LPE4 126 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 A0A1W2PPZ6 126 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 TRIM49BA6NDI0 452 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 ISM1B1AKI9 464 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 GCOM1H8Y6P7 765 aaPredicted RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 NOP56O00567 594 aaKnown RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 SCAMP2O15127 329 aaKnown RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 NOBOXO60393 691 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 TMCC1O94876 653 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 CLTAP09496 248 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 KLRK1P26718 216 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 TXKP42681 527 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 MCAMP43121 646 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 KCNJ5P48544 419 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 OAZ1P54368 228 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 BCAT1P54687 386 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 OXCT1P55809 520 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 ACTR3P61158 418 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 NKX6-1P78426 367 aaPredicted RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 PTSQ03393 145 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 ZP2Q05996 745 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 FGL2Q14314 439 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 LARS2Q15031 903 aaKnown RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 SLC39A14Q15043 492 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 SF3B4Q15427 424 aaKnown RBP eCLIP4.84□□□□□ -1.639e-6■■■■□ 20
SMG1-207ENST00000563235 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.84□□□□□ -1.63
SMG1-207ENST00000563235 SFRP5Q5T4F7 317 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 MAP1SQ66K74 1059 aaPredicted RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 STXBP4Q6ZWJ1 553 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 CHST9Q7L1S5 443 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 KRT27Q7Z3Y8 459 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 FAM129CQ86XR2 697 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 RHOT2Q8IXI1 618 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 ZNF248Q8NDW4 579 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 ASAP3Q8TDY4 903 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 NRG4Q8WWG1 115 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 DVL3Q92997 716 aaPredicted RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 PTERQ96BW5 349 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 MED30Q96HR3 178 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 NEU1Q99519 415 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 FUZQ9BT04 418 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 EIF2AQ9BY44 585 aaKnown RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 PARD6GQ9BYG4 376 aaPredicted RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 TRIM54Q9BYV2 358 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 OSBPL8Q9BZF1 889 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 P2RY12Q9H244 342 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 LRRC40Q9H9A6 602 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.84□□□□□ -1.63
SMG1-207ENST00000563235 DNAJC11Q9NVH1 559 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.84□□□□□ -1.63
SMG1-207ENST00000563235 FAM120CQ9NX05 1096 aaKnown RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 ZSCAN32Q9NX65 697 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 MSRAQ9UJ68 235 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 DNPEPQ9ULA0 475 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 SATB2Q9UPW6 733 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 MTO1Q9Y2Z2 717 aaKnown RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 PCDHA13Q9Y5I0 950 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 NUP153P49790 1475 aaKnown RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 AFF2P51816 1311 aa4.84□□□□□ -1.64
SMG1-207ENST00000563235 MYBBP1AQ9BQG0 1328 aaKnown RBP4.84□□□□□ -1.64
SMG1-207ENST00000563235 FMN1Q68DA7 1419 aa4.84□□□□□ -1.64
SMG1-207ENST00000563235 MROH1Q8NDA8 1641 aa4.84□□□□□ -1.64
SMG1-207ENST00000563235 PZPP20742 1482 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 CAMSAP2Q08AD1 1489 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 PARD3Q8TEW0 1356 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 RBAK-RBAKDNI3L0D1 243 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 WFS1O76024 890 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 RECQL5O94762 991 aaPredicted RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 UBOX5O94941 541 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 IL1BP01584 269 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 ABHD2P08910 425 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 OR8G3PP0DMU2 310 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 KRT4P19013 534 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 NME2P22392 152 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 ATP5C1P36542 298 aaKnown RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 IL12RB1P42701 662 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 CRYBB1P53674 252 aaPredicted RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 KIAA1024LP59773 190 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 SCAPQ12770 1279 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 NFIL3Q16649 462 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 FAM76BQ5HYJ3 339 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 GNASQ5JWF2 1037 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 MANEAQ5SRI9 462 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 C20orf194Q5TEA3 1177 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 MBNL2Q5VZF2 373 aaKnown RBP4.83□□□□□ -1.64
SMG1-207ENST00000563235 HEPHL1Q6MZM0 1159 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 PMF1Q6P1K2 205 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 PRR23CQ6ZRP0 262 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 ASPGQ86U10 573 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 STX12Q86Y82 276 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 ITPRIPQ8IWB1 547 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 DSELQ8IZU8 1212 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 CCNYL1Q8N7R7 359 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 KREMEN2Q8NCW0 462 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 TRPV1Q8NER1 839 aa4.83□□□□□ -1.64
SMG1-207ENST00000563235 NFKBIDQ8NI38 313 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms