RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 C17orf53Q8N3J3 647 aaPredicted RBP3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 PLD5Q8N7P1 536 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 KDM1BQ8NB78 822 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 NFKBIDQ8NI38 313 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 HSPH1Q92598 858 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 PERPQ96FX8 193 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 ZNF419Q96HQ0 510 aaPredicted RBP3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 RSRC1Q96IZ7 334 aaKnown RBP3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 KLHL15Q96M94 604 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 MXD3Q9BW11 206 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 RANBP17Q9H2T7 1088 aaKnown RBP3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 MAP6D1Q9H9H5 199 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 DECR2Q9NUI1 292 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 PPP1R14DQ9NXH3 145 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 NLKQ9UBE8 527 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 PEMTQ9UBM1 199 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 CORO1CQ9ULV4 474 aaPredicted RBP3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 RSF1Q96T23 1441 aaPredicted RBP3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 hCG_1807616A0A1W2PRN6 198 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 TARSL2A2RTX5 802 aaKnown RBP3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 C17orf102A2RUQ5 167 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 NPIPB15A6NHN6 443 aaPredicted RBP3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 TEX22C9J3V5 150 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 FAM157AC9JC47 383 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 PTGES3LE9PB15 166 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 TGFB1I1O43294 461 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 TNFSF14O43557 240 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 HNRNPCL1O60812 293 aaKnown RBP3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 CBX6O95503 412 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 MLYCDO95822 493 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 CLEC3BP05452 202 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 ACADMP11310 421 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 TNFSF8P32971 234 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 PBX3P40426 434 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 ALDH7A1P49419 539 aaKnown RBP3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 BLKP51451 505 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 EFNB1P98172 346 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 MC1RQ01726 317 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 GAD2Q05329 585 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 EIF4A2Q14240 407 aaKnown RBP3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 KLHL22Q53GT1 634 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 KLHL24Q6TFL4 600 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 GPSM1Q86YR5 675 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 TMC8Q8IU68 726 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 GHDCQ8N2G8 530 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 TTC39CQ8N584 583 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 DPP10Q8N608 796 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 ZMIZ2Q8NF64 920 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 CMASQ8NFW8 434 aaPredicted RBP3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 OR4N2Q8NGD1 307 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 BICD2Q8TD16 824 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 TMEM174Q8WUU8 243 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 NSMCE1Q8WV22 266 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 TMEM170AQ8WVE7 144 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 VCPIP1Q96JH7 1222 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 EBF3Q9H4W6 596 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 CXorf56Q9H5V9 222 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 FZD3Q9NPG1 666 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 ENTPD7Q9NQZ7 604 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 DIAPH3Q9NSV4 1193 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 ZBTB40Q9NUA8 1239 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 TAS2R10Q9NYW0 307 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 SEL1LQ9UBV2 794 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 RPS6KA6Q9UK32 745 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 MKLN1Q9UL63 735 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 COG5Q9UP83 839 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 CACNA1IQ9P0X4 2223 aa3.44□□□□□ -1.86
SHCBP1-202ENST00000563219 F5H0A9 414 aaPredicted RBP3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 GTPBP1O00178 669 aaKnown RBP3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 LDLRAD4O15165 306 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 P4HA2O15460 535 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 CEP104O60308 925 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 NDUFB8O95169 186 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 ALOX12P18054 663 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 TNFRSF1BP20333 461 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 TBXAS1P24557 533 aaPredicted RBP3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 YWHAQP27348 245 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 CCKARP32238 428 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 HOXD13P35453 343 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 PPARGP37231 505 aaPredicted RBP3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 DPP6P42658 865 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 CENPAP49450 140 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 RASSF2P50749 326 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 LINC00205P59089 165 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 PTP4A2Q12974 167 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 MAMLD1Q13495 774 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 CUL4AQ13619 759 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 WTAPQ15007 396 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 ME3Q16798 604 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 Q5PR19 223 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 MANEAQ5SRI9 462 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 RUSC1-AS1Q66K80 236 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 HMBOX1Q6NT76 420 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 IL20RBQ6UXL0 311 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 PRSS45Q7RTY3 260 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 SZRD1Q7Z422 152 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 SERPINA11Q86U17 422 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 CPXM2Q8N436 756 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 SRBD1Q8N5C6 995 aaKnown RBP3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 ZNF548Q8NEK5 533 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms