RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 MAGEB5Q9BZ81 275 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 DPH1Q9BZG8 443 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 RETREG1Q9H6L5 497 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 ASCL3Q9NQ33 180 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 SAMSN1Q9NSI8 373 aaKnown RBP13.16□□□□□ -0.3
SF3B3-202ENST00000562722 NOCTQ9UK39 431 aaKnown RBP13.16□□□□□ -0.3
SF3B3-202ENST00000562722 ENTPD2Q9Y5L3 495 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 TRPM6Q9BX84 2022 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 PTPRQQ9UMZ3 2332 aa13.16□□□□□ -0.3
SF3B3-202ENST00000562722 ZSCAN5CA6NGD5 496 aaPredicted RBP13.15□□□□□ -0.3
SF3B3-202ENST00000562722 CAPN8A6NHC0 703 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 C2CD4BA6NLJ0 364 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 GCATO75600 419 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 TCEA3O75764 348 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 KRT3P12035 628 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 EIF4A3P38919 411 aaKnown RBP13.15□□□□□ -0.3
SF3B3-202ENST00000562722 PTPN9P43378 593 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 NSFP46459 744 aaKnown RBP13.15□□□□□ -0.3
SF3B3-202ENST00000562722 POLR2FP61218 127 aaKnown RBP13.15□□□□□ -0.3
SF3B3-202ENST00000562722 YPEL5P62699 121 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 PPARDQ03181 441 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 SPIDRQ14159 915 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 KLHL40Q2TBA0 621 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 EFHC2Q5JST6 749 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 C6orf132Q5T0Z8 1188 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 MACC1Q6ZN28 852 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 STRADAQ7RTN6 431 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 SLC35F3Q8IY50 421 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 ARL14Q8N4G2 192 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 NETO2Q8NC67 525 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 SCG3Q8WXD2 468 aaKnown RBP13.15□□□□□ -0.3
SF3B3-202ENST00000562722 CENPTQ96BT3 561 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 GRAMD1AQ96CP6 724 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 CCDC97Q96F63 343 aaPredicted RBP13.15□□□□□ -0.3
SF3B3-202ENST00000562722 PCMTD1Q96MG8 357 aaPredicted RBP13.15□□□□□ -0.3
SF3B3-202ENST00000562722 SELENOOQ9BVL4 669 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 BOCQ9BWV1 1114 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 VPS16Q9H269 839 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 NLRC4Q9NPP4 1024 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 FAM207AQ9NSI2 230 aaPredicted RBP13.15□□□□□ -0.3
SF3B3-202ENST00000562722 SEPT11Q9NVA2 429 aaKnown RBP13.15□□□□□ -0.3
SF3B3-202ENST00000562722 SIRPGQ9P1W8 387 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 GULP1Q9UBP9 304 aa13.15□□□□□ -0.3
SF3B3-202ENST00000562722 ANKRD62A6NC57 917 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 LMO7DNF2Z398 122 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 AREL1O15033 823 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 YY2O15391 372 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 CREB3O43889 395 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 LZTS3O60299 673 aaPredicted RBP13.14□□□□□ -0.31
SF3B3-202ENST00000562722 CYP1A1P04798 512 aaPredicted RBP13.14□□□□□ -0.31
SF3B3-202ENST00000562722 CTSEP14091 401 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 TSHRP16473 764 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 ITIH2P19823 946 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 GPD1P21695 349 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 EPHB2P29323 1055 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 SOX5P35711 763 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 KLK7P49862 253 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 HDAC4P56524 1084 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 FMO1Q01740 532 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 VAC14Q08AM6 782 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 IRF4Q15306 451 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 SYCP1Q15431 976 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 FKBP15Q5T1M5 1219 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 CFAP58Q5T655 872 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 SCYL2Q6P3W7 929 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 PCSK4Q6UW60 755 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 TRIM72Q6ZMU5 477 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 RD3Q7Z3Z2 195 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 SLFN11Q7Z7L1 901 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 HID1Q8IV36 788 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 WDR36Q8NI36 951 aaKnown RBP13.14□□□□□ -0.31
SF3B3-202ENST00000562722 WDR48Q8TAF3 677 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 CASKIN2Q8WXE0 1202 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 EXOC2Q96KP1 924 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 SLC46A1Q96NT5 459 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 CCDC3Q9BQI4 270 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 TTYH3Q9C0H2 523 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 NUP62CLQ9H1M0 184 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 GANQ9H2C0 597 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 MBNL1Q9NR56 388 aaKnown RBP13.14□□□□□ -0.31
SF3B3-202ENST00000562722 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.14□□□□□ -0.31
SF3B3-202ENST00000562722 ADAM22Q9P0K1 906 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 PADI4Q9UM07 663 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 NEU3Q9UQ49 428 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 PCDHGA8Q9Y5G5 932 aa13.14□□□□□ -0.31
SF3B3-202ENST00000562722 BPTFQ12830 3046 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 DOCK4Q8N1I0 1966 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 A0A1W2PNU3 283 aaPredicted RBP13.13□□□□□ -0.31
SF3B3-202ENST00000562722 PMS2P1A4D2B8 440 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 TOR1BO14657 336 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 TNFSF15O95150 251 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 CALB1P05937 261 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 TIMP2P16035 220 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 CHRNB2P17787 502 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 HTR1BP28222 390 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 RFC1P35251 1148 aaPredicted RBP13.13□□□□□ -0.31
SF3B3-202ENST00000562722 STAT1P42224 750 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 BLKP51451 505 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 ELP6Q0PNE2 266 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 LRRC14Q15048 493 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms