RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 DKK3Q9UBP4 350 aa19.56■□□□□ 0.72
TMEM249-202ENST00000562477 LCMT1Q9UIC8 334 aa19.56■□□□□ 0.72
TMEM249-202ENST00000562477 BTBD3Q9Y2F9 522 aa19.56■□□□□ 0.72
TMEM249-202ENST00000562477 SPEGQ15772 3267 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 NEMP1O14524 444 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 LCA5LO95447 670 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 PAK4O96013 591 aaPredicted RBP19.55■□□□□ 0.72
TMEM249-202ENST00000562477 PRKCGP05129 697 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 TNNT1P13805 278 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 KDELR1P24390 212 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 AKT2P31751 481 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 SERPINB6P35237 376 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 ARHGAP25P42331 645 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 RPS21P63220 83 aaKnown RBP19.55■□□□□ 0.72
TMEM249-202ENST00000562477 SEMG2Q02383 582 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 RFTN1Q14699 578 aaPredicted RBP19.55■□□□□ 0.72
TMEM249-202ENST00000562477 STAT4Q14765 748 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 PDK2Q15119 407 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 SHBQ15464 509 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 SLC45A4Q5BKX6 768 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 KIAA1161Q6NSJ0 714 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 KDM7AQ6ZMT4 941 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 PGBD5Q8N414 524 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 MFSD2AQ8NA29 543 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 RAB7BQ96AH8 199 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 SLC17A9Q9BYT1 436 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 GOLPH3Q9H4A6 298 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 SLC32A1Q9H598 525 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 SUV39H2Q9H5I1 410 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 GDF3Q9NR23 364 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 SEPT3Q9UH03 358 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 PCDHA13Q9Y5I0 950 aa19.55■□□□□ 0.72
TMEM249-202ENST00000562477 TSPAN11A1L157 253 aa19.54■□□□□ 0.72
TMEM249-202ENST00000562477 LRRD1A4D1F6 860 aa19.54■□□□□ 0.72
TMEM249-202ENST00000562477 C3orf70A6NLC5 250 aaPredicted RBP19.54■□□□□ 0.72
TMEM249-202ENST00000562477 TSPAN6O43657 245 aa19.54■□□□□ 0.72
TMEM249-202ENST00000562477 HNRNPA2B1P22626 353 aaKnown RBP19.54■□□□□ 0.72
TMEM249-202ENST00000562477 FECHP22830 423 aa19.54■□□□□ 0.72
TMEM249-202ENST00000562477 CSNK1DP48730 415 aa19.54■□□□□ 0.72
TMEM249-202ENST00000562477 CCT8P50990 548 aa19.54■□□□□ 0.72
TMEM249-202ENST00000562477 GBE1Q04446 702 aa19.54■□□□□ 0.72
TMEM249-202ENST00000562477 PAFAH1B3Q15102 231 aaKnown RBP19.54■□□□□ 0.72
TMEM249-202ENST00000562477 TCEAL1Q15170 157 aa19.54■□□□□ 0.72
TMEM249-202ENST00000562477 GCNT7Q6ZNI0 430 aa19.54■□□□□ 0.72
TMEM249-202ENST00000562477 CCDC170Q8IYT3 715 aa19.54■□□□□ 0.72
TMEM249-202ENST00000562477 SETD7Q8WTS6 366 aaKnown RBP19.54■□□□□ 0.72
TMEM249-202ENST00000562477 SKA1Q96BD8 255 aa19.54■□□□□ 0.72
TMEM249-202ENST00000562477 ZNF599Q96NL3 588 aa19.54■□□□□ 0.72
TMEM249-202ENST00000562477 PSKH2Q96QS6 385 aa19.54■□□□□ 0.72
TMEM249-202ENST00000562477 ELF4Q99607 663 aaPredicted RBP19.54■□□□□ 0.72
TMEM249-202ENST00000562477 WRAP53Q9BUR4 548 aaKnown RBP19.54■□□□□ 0.72
TMEM249-202ENST00000562477 PCDH12Q9NPG4 1184 aa19.54■□□□□ 0.72
TMEM249-202ENST00000562477 TP53BP1Q12888 1972 aaPredicted RBP19.53■□□□□ 0.72
TMEM249-202ENST00000562477 A0A1B0GTQ1 180 aa19.53■□□□□ 0.72
TMEM249-202ENST00000562477 RCCD1A6NED2 376 aa19.53■□□□□ 0.72
TMEM249-202ENST00000562477 MMP20O60882 483 aa19.53■□□□□ 0.72
TMEM249-202ENST00000562477 CBFA2T3O75081 653 aa19.53■□□□□ 0.72
TMEM249-202ENST00000562477 COMTP21964 271 aa19.53■□□□□ 0.72
TMEM249-202ENST00000562477 CYLC1P35663 651 aaPredicted RBP19.53■□□□□ 0.72
TMEM249-202ENST00000562477 NOP2P46087 812 aaKnown RBP19.53■□□□□ 0.72
TMEM249-202ENST00000562477 SCNN1BP51168 640 aa19.53■□□□□ 0.72
TMEM249-202ENST00000562477 SIM1P81133 766 aaPredicted RBP19.53■□□□□ 0.72
TMEM249-202ENST00000562477 GALNT2Q10471 571 aa19.53■□□□□ 0.72
TMEM249-202ENST00000562477 SLC10A2Q12908 348 aaPredicted RBP19.53■□□□□ 0.72
TMEM249-202ENST00000562477 ZNF235Q14590 738 aa19.53■□□□□ 0.72
TMEM249-202ENST00000562477 RAD9BQ6WBX8 426 aa19.53■□□□□ 0.72
TMEM249-202ENST00000562477 GATAD2AQ86YP4 633 aa19.53■□□□□ 0.72
TMEM249-202ENST00000562477 MAP7D3Q8IWC1 876 aa19.53■□□□□ 0.72
TMEM249-202ENST00000562477 OR13H1Q8NG92 308 aa19.53■□□□□ 0.72
TMEM249-202ENST00000562477 TUBGCP5Q96RT8 1024 aa19.53■□□□□ 0.72
TMEM249-202ENST00000562477 C1QTNF2Q9BXJ5 285 aa19.53■□□□□ 0.72
TMEM249-202ENST00000562477 ATP13A3Q9H7F0 1226 aa19.53■□□□□ 0.72
TMEM249-202ENST00000562477 PCOLCE2Q9UKZ9 415 aa19.53■□□□□ 0.72
TMEM249-202ENST00000562477 PCDHGB2Q9Y5G2 931 aa19.53■□□□□ 0.72
TMEM249-202ENST00000562477 SHROOM3Q8TF72 1996 aa19.53■□□□□ 0.72
TMEM249-202ENST00000562477 POM121BA6NF01 834 aa19.52■□□□□ 0.72
TMEM249-202ENST00000562477 KRT1P04264 644 aa19.52■□□□□ 0.72
TMEM249-202ENST00000562477 THEGLP0DJG4 465 aa19.52■□□□□ 0.72
TMEM249-202ENST00000562477 XPAP23025 273 aaPredicted RBP19.52■□□□□ 0.72
TMEM249-202ENST00000562477 GARSP41250 739 aaKnown RBP19.52■□□□□ 0.72
TMEM249-202ENST00000562477 MAXP61244 160 aa19.52■□□□□ 0.72
TMEM249-202ENST00000562477 NSUN2Q08J23 767 aaKnown RBP eCLIP19.52■□□□□ 0.72
TMEM249-202ENST00000562477 SPA17Q15506 151 aa19.52■□□□□ 0.72
TMEM249-202ENST00000562477 DBX2Q6ZNG2 339 aa19.52■□□□□ 0.72
TMEM249-202ENST00000562477 IQCHQ86VS3 1027 aa19.52■□□□□ 0.72
TMEM249-202ENST00000562477 SPC24Q8NBT2 197 aa19.52■□□□□ 0.72
TMEM249-202ENST00000562477 KLHDC7BQ96G42 594 aa19.52■□□□□ 0.72
TMEM249-202ENST00000562477 BMFQ96LC9 184 aa19.52■□□□□ 0.72
TMEM249-202ENST00000562477 ZNF641Q96N77 438 aaPredicted RBP19.52■□□□□ 0.72
TMEM249-202ENST00000562477 RNF157Q96PX1 679 aa19.52■□□□□ 0.72
TMEM249-202ENST00000562477 KLF6Q99612 283 aaPredicted RBP19.52■□□□□ 0.72
TMEM249-202ENST00000562477 SALL4Q9UJQ4 1053 aa19.52■□□□□ 0.72
TMEM249-202ENST00000562477 REXO2Q9Y3B8 237 aaKnown RBP19.52■□□□□ 0.72
TMEM249-202ENST00000562477 EPN1Q9Y6I3 576 aaPredicted RBP19.52■□□□□ 0.72
TMEM249-202ENST00000562477 SPOPO43791 374 aa19.51■□□□□ 0.71
TMEM249-202ENST00000562477 NDUFA10O95299 355 aa19.51■□□□□ 0.71
TMEM249-202ENST00000562477 TOP3BO95985 862 aaKnown RBP19.51■□□□□ 0.71
TMEM249-202ENST00000562477 CR2P20023 1033 aa19.51■□□□□ 0.71
TMEM249-202ENST00000562477 PMLP29590 882 aa19.51■□□□□ 0.71
TMEM249-202ENST00000562477 SERPINA4P29622 427 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms