RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 PTGFRNQ9P2B2 879 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 RPTORQ8N122 1335 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 TOP3BO95985 862 aaKnown RBP11.33□□□□□ -0.6
RPAP1-204ENST00000562303 CDC25CP30307 473 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 AKT2P31751 481 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 RBBP4Q09028 425 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 TBX2Q13207 712 aaPredicted RBP11.33□□□□□ -0.6
RPAP1-204ENST00000562303 ZNF549Q6P9A3 640 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 CCDC185Q8N715 623 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 ZNF563Q8TA94 476 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 ZNF75CPQ92670 426 aaPredicted RBP11.33□□□□□ -0.6
RPAP1-204ENST00000562303 SLC35C1Q96A29 364 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 MARK4Q96L34 752 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 PPP3R2Q96LZ3 170 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 IDI2Q9BXS1 227 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 CXorf56Q9H5V9 222 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 AGO1Q9UL18 857 aaKnown RBP11.33□□□□□ -0.6
RPAP1-204ENST00000562303 IRF6O14896 467 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 APODP05090 189 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 TFPIP10646 304 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 H2AFXP16104 143 aaPredicted RBP11.33□□□□□ -0.6
RPAP1-204ENST00000562303 GLRA2P23416 452 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 IGFALSP35858 605 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 RPL38P63173 70 aaKnown RBP11.33□□□□□ -0.6
RPAP1-204ENST00000562303 GALNT3Q14435 633 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 GCNT7Q6ZNI0 430 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 CPA6Q8N4T0 437 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 ANKRD7Q92527 254 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 HSFY1Q96LI6 401 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 DGCR6LQ9BY27 220 aa11.33□□□□□ -0.6
RPAP1-204ENST00000562303 MRPS7Q9Y2R9 242 aaKnown RBP11.33□□□□□ -0.6
RPAP1-204ENST00000562303 RNF17Q9BXT8 1623 aaKnown RBP11.33□□□□□ -0.6
RPAP1-204ENST00000562303 LOC100506127A0A0U1RQW1 187 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 SIGLEC16A6NMB1 481 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 TISP43B9A030 160 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 NT5C1B-RDH14C9J2C7 533 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 CCNDBP1O95273 360 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 ALADP13716 330 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 ITGA2P17301 1181 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 SMIM11AP58511 58 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 NOGQ13253 232 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 DGCR6Q14129 220 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 CBX2Q14781 532 aaPredicted RBP11.32□□□□□ -0.6
RPAP1-204ENST00000562303 AKIRIN2Q53H80 203 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 UNC5AQ6ZN44 842 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 PIGZQ86VD9 579 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 C8orf59Q8N0T1 100 aaPredicted RBP11.32□□□□□ -0.6
RPAP1-204ENST00000562303 MAB21L3Q8N8X9 362 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 GPR152Q8TDT2 470 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 PRCCQ92733 491 aaPredicted RBP11.32□□□□□ -0.6
RPAP1-204ENST00000562303 CAVIN3Q969G5 261 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 MTMR8Q96EF0 704 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 FNDC11Q9BVV2 318 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 NRDE2Q9H7Z3 1164 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 SLC35C2Q9NQQ7 365 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 ZNF510Q9Y2H8 683 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 A0A087X0B3 334 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 ABHD14A-ACY1A0A1B0GW23 586 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 ZSCAN5CA6NGD5 496 aaPredicted RBP11.32□□□□□ -0.6
RPAP1-204ENST00000562303 CHADO15335 359 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 PIRTP0C851 137 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 ADSLP30566 484 aaPredicted RBP11.32□□□□□ -0.6
RPAP1-204ENST00000562303 BUD31P41223 144 aaPredicted RBP11.32□□□□□ -0.6
RPAP1-204ENST00000562303 SLC12A3P55017 1021 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 TAF5Q15542 800 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 MAPKAPK3Q16644 382 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 TIMM50Q3ZCQ8 353 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 CDKAL1Q5VV42 579 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 C12orf50Q8NA57 414 aaPredicted RBP11.32□□□□□ -0.6
RPAP1-204ENST00000562303 RAD51AP1Q96B01 352 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 MTMR9Q96QG7 549 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 NUAK2Q9H093 628 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 DDX3XO00571 662 aaKnown RBP eCLIP11.32□□□□□ -0.6
RPAP1-204ENST00000562303 FGFR3P22607 806 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 WASHC2DQ5SRD0 308 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 APOBEC3HQ6NTF7 200 aaKnown RBP11.32□□□□□ -0.6
RPAP1-204ENST00000562303 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.32□□□□□ -0.6
RPAP1-204ENST00000562303 ZCCHC9Q8N567 271 aaKnown RBP11.32□□□□□ -0.6
RPAP1-204ENST00000562303 BHLHE22Q8NFJ8 381 aaPredicted RBP11.32□□□□□ -0.6
RPAP1-204ENST00000562303 RHOBTB2Q9BYZ6 727 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 DNAJC18Q9H819 358 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.32□□□□□ -0.6
RPAP1-204ENST00000562303 IQGAP3Q86VI3 1631 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 ZSCAN5DPP0CG00 497 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 ZNF143P52747 638 aaPredicted RBP11.32□□□□□ -0.6
RPAP1-204ENST00000562303 CRYBB1P53674 252 aaPredicted RBP11.32□□□□□ -0.6
RPAP1-204ENST00000562303 SLC34A1Q06495 639 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 TSC22D1Q15714 1073 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 PLA2G4EQ3MJ16 856 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 Q96MT0 163 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 MRTO4Q9UKD2 239 aaKnown RBP11.32□□□□□ -0.6
RPAP1-204ENST00000562303 ACTL7BQ9Y614 415 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 IDH3BO43837 385 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 TFEBP19484 476 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 PAX3P23760 479 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 MAXP61244 160 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 CDK16Q00536 496 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 PCBP1Q15365 356 aaKnown RBP eCLIP11.32□□□□□ -0.64e-8■■■■■ 48.3
RPAP1-204ENST00000562303 ZNF697Q5TEC3 545 aa11.32□□□□□ -0.6
RPAP1-204ENST00000562303 PHYKPLQ8IUZ5 450 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms