RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SLC35B2Q8TB61 432 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 NSMCE1Q8WV22 266 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 TFB1MQ8WVM0 346 aaKnown RBP13.57□□□□□ -0.24
CDH1-204ENST00000562118 FOXJ1Q92949 421 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 VAT1Q99536 393 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 FRMD8P1Q9BZ68 369 aaPredicted RBP13.57□□□□□ -0.24
CDH1-204ENST00000562118 SUV39H2Q9H5I1 410 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 C6orf106Q9H6K1 298 aaPredicted RBP13.57□□□□□ -0.24
CDH1-204ENST00000562118 ATP13A3Q9H7F0 1226 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 NOD2Q9HC29 1040 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 RBM22Q9NW64 420 aaKnown RBP eCLIP13.57□□□□□ -0.24
CDH1-204ENST00000562118 PILRBQ9UKJ0 227 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 TTC7AQ9ULT0 858 aaPredicted RBP13.57□□□□□ -0.24
CDH1-204ENST00000562118 INVSQ9Y283 1065 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.57□□□□□ -0.24
CDH1-204ENST00000562118 PPIL1Q9Y3C6 166 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 FADS3Q9Y5Q0 445 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 TRPM6Q9BX84 2022 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 CFAP54Q96N23 3096 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 EP300Q09472 2414 aaPredicted RBP13.56□□□□□ -0.24
CDH1-204ENST00000562118 BPTFQ12830 3046 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 SCN8AQ9UQD0 1980 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 A0A1W2PQ67 120 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 TCRBV7S2A1N4TA0A589 114 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 KCNK1O00180 336 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 KPNA3O00505 521 aaPredicted RBP13.56□□□□□ -0.24
CDH1-204ENST00000562118 CES2O00748 559 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 BNIP3LO60238 219 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 PIGNO95427 931 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 UGT2B4P06133 528 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 SERPINA4P29622 427 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 CD68P34810 354 aaPredicted RBP13.56□□□□□ -0.24
CDH1-204ENST00000562118 DPP6P42658 865 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 DNA2P51530 1060 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 NIPAL4Q0D2K0 466 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 CCDC15Q0P6D6 951 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 LLGL1Q15334 1064 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 OASLQ15646 514 aaKnown RBP13.56□□□□□ -0.24
CDH1-204ENST00000562118 CEP68Q76N32 757 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 TTC13Q8NBP0 860 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 LRRN4Q8WUT4 740 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 RTP4Q96DX8 246 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 IMP4Q96G21 291 aaKnown RBP13.56□□□□□ -0.24
CDH1-204ENST00000562118 TEKT5Q96M29 485 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 KLHL32Q96NJ5 620 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 OMDQ99983 421 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 GPR174Q9BXC1 333 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 USP29Q9HBJ7 922 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 NT5MQ9NPB1 228 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 R3HDM2Q9Y2K5 976 aaKnown RBP13.56□□□□□ -0.24
CDH1-204ENST00000562118 ZKSCAN5Q9Y2L8 839 aa13.56□□□□□ -0.24
CDH1-204ENST00000562118 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 LRRC72A6NJI9 287 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 PLK4O00444 970 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 FANCGO15287 622 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 JCHAINP01591 159 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 TIMP2P16035 220 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 NUDT1P36639 197 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 SCNN1BP51168 640 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 MAXP61244 160 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 SKOR1P84550 965 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 AP1B1Q10567 949 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 TRAF2Q12933 501 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 AGERQ15109 404 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 HS1BP3Q53T59 392 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 SEL1L2Q5TEA6 688 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 LYSMD4Q5XG99 296 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 KIAA0895LQ68EN5 471 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 DRICH1Q6PGQ1 229 aaPredicted RBP13.55□□□□□ -0.24
CDH1-204ENST00000562118 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.55□□□□□ -0.24
CDH1-204ENST00000562118 CAMK1DQ8IU85 385 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 TMEFF1Q8IYR6 380 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 SLC35F6Q8N357 371 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 CCNYQ8ND76 341 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 HTR3CQ8WXA8 447 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 ASB12Q8WXK4 309 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 BIRC7Q96CA5 298 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 MCCC1Q96RQ3 725 aaPredicted RBP13.55□□□□□ -0.24
CDH1-204ENST00000562118 SEMA3CQ99985 751 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 TDRD1Q9BXT4 1180 aaKnown RBP13.55□□□□□ -0.24
CDH1-204ENST00000562118 EBF2Q9HAK2 575 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 HAUS2Q9NVX0 235 aa13.55□□□□□ -0.24
CDH1-204ENST00000562118 TRMT1Q9NXH9 659 aaKnown RBP13.55□□□□□ -0.24
CDH1-204ENST00000562118 GON4LQ3T8J9 2241 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 SDK1Q7Z5N4 2213 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 CFAP69A5D8W1 941 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 UPK3BL1B0FP48 263 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 UPK3BL2E5RIL1 263 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 KCNK3O14649 394 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 KIF5CO60282 957 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 NDUFS2O75306 463 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 PGLSO95336 258 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 PRLP01236 227 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 RBP3P10745 1247 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 MMP12P39900 470 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 PPP2CBP62714 309 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 PPP2CAP67775 309 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 DSC2Q02487 901 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 CREB5Q02930 508 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 BCL2L1Q07817 233 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms