RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 PRSS16Q9NQE7 514 aa22.74■■□□□ 1.23
SYNGR3-202ENST00000562045 SLC25A13Q9UJS0 675 aa22.74■■□□□ 1.23
SYNGR3-202ENST00000562045 HS3ST2Q9Y278 367 aa22.74■■□□□ 1.23
SYNGR3-202ENST00000562045 TPSB2P20231 275 aa22.74■■□□□ 1.23
SYNGR3-202ENST00000562045 CD68P34810 354 aaPredicted RBP22.74■■□□□ 1.23
SYNGR3-202ENST00000562045 FNTBP49356 437 aa22.74■■□□□ 1.23
SYNGR3-202ENST00000562045 COPAP53621 1224 aa22.74■■□□□ 1.23
SYNGR3-202ENST00000562045 LBRQ14739 615 aaKnown RBP22.74■■□□□ 1.23
SYNGR3-202ENST00000562045 TPSAB1Q15661 275 aa22.74■■□□□ 1.23
SYNGR3-202ENST00000562045 HNRNPA1L2Q32P51 320 aaKnown RBP22.74■■□□□ 1.23
SYNGR3-202ENST00000562045 ANKRD22Q5VYY1 191 aa22.74■■□□□ 1.23
SYNGR3-202ENST00000562045 PPP1R21Q6ZMI0 780 aa22.74■■□□□ 1.23
SYNGR3-202ENST00000562045 TEX26Q8N6G2 289 aa22.74■■□□□ 1.23
SYNGR3-202ENST00000562045 HMGB4Q8WW32 186 aa22.74■■□□□ 1.23
SYNGR3-202ENST00000562045 PPP1R2P1Q96PQ5 205 aa22.74■■□□□ 1.23
SYNGR3-202ENST00000562045 FRMD8Q9BZ67 464 aaPredicted RBP22.74■■□□□ 1.23
SYNGR3-202ENST00000562045 TPSD1Q9BZJ3 242 aa22.74■■□□□ 1.23
SYNGR3-202ENST00000562045 EIF2B3Q9NR50 452 aaKnown RBP22.74■■□□□ 1.23
SYNGR3-202ENST00000562045 HAUS2Q9NVX0 235 aa22.74■■□□□ 1.23
SYNGR3-202ENST00000562045 FANCMQ8IYD8 2048 aa22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 SIN3BO75182 1162 aa22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 ZNF821O75541 412 aaPredicted RBP22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 TMEM63AO94886 807 aa22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 NFKB1P19838 968 aa22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 MMP13P45452 471 aa22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 CDK16Q00536 496 aa22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 SLC10A7Q0GE19 358 aa22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 CAMK2GQ13555 558 aaPredicted RBP22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 PRPSAP1Q14558 356 aa22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 SLMAPQ14BN4 828 aa22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 DLG2Q15700 870 aa22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 C9orf64Q5T6V5 341 aa22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 CACUL1Q86Y37 369 aa22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 BBS5Q8N3I7 341 aa22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 ATP11CQ8NB49 1132 aa22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 KDM1BQ8NB78 822 aa22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 NELL1Q92832 810 aa22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 ZNF419Q96HQ0 510 aaPredicted RBP22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 CD93Q9NPY3 652 aa22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 UBA2Q9UBT2 640 aaPredicted RBP22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 FCF1Q9Y324 198 aaKnown RBP22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 TTLL3Q9Y4R7 772 aa22.73■■□□□ 1.23
SYNGR3-202ENST00000562045 TCRBV7S3A2A0A539 114 aa22.72■■□□□ 1.23
SYNGR3-202ENST00000562045 ATP9BO43861 1147 aa22.72■■□□□ 1.23
SYNGR3-202ENST00000562045 APBB3O95704 486 aa22.72■■□□□ 1.23
SYNGR3-202ENST00000562045 HLA-DQB2P05538 268 aa22.72■■□□□ 1.23
SYNGR3-202ENST00000562045 NDUFV2P19404 249 aa22.72■■□□□ 1.23
SYNGR3-202ENST00000562045 LMAN1P49257 510 aa22.72■■□□□ 1.23
SYNGR3-202ENST00000562045 RFTN1Q14699 578 aaPredicted RBP22.72■■□□□ 1.23
SYNGR3-202ENST00000562045 ACCSLQ4AC99 568 aa22.72■■□□□ 1.23
SYNGR3-202ENST00000562045 Q6ZVU0 165 aa22.72■■□□□ 1.23
SYNGR3-202ENST00000562045 TMC3Q7Z5M5 1100 aa22.72■■□□□ 1.23
SYNGR3-202ENST00000562045 RASSF3Q86WH2 238 aa22.72■■□□□ 1.23
SYNGR3-202ENST00000562045 CCDC25Q86WR0 208 aa22.72■■□□□ 1.23
SYNGR3-202ENST00000562045 GLOD4Q9HC38 313 aa22.72■■□□□ 1.23
SYNGR3-202ENST00000562045 POLMQ9NP87 494 aaPredicted RBP22.72■■□□□ 1.23
SYNGR3-202ENST00000562045 CACNA1HO95180 2353 aa22.72■■□□□ 1.23
SYNGR3-202ENST00000562045 GOLGA6CA6NDK9 693 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 GOLGA6BA6NDN3 693 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 ERI2A8K979 691 aaKnown RBP22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 GOLGA6DP0CG33 693 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 SERPINH1P50454 418 aaKnown RBP22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 VASPP50552 380 aaPredicted RBP22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 DHX9Q08211 1270 aaKnown RBP22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 ZNF235Q14590 738 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 MREGQ8N565 214 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 CAMKK1Q8N5S9 505 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 MRGPRX1Q96LB2 322 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 FCRL5Q96RD9 977 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 PHACTR1Q9C0D0 580 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 TNKS2Q9H2K2 1166 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 GOLGA6AQ9NYA3 693 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 ATP8A1Q9Y2Q0 1164 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 F5H423 210 aaPredicted RBP22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 GOLGA8MH3BSY2 632 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 SYNCRIPO60506 623 aaKnown RBP22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 PPFIA2O75334 1257 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 HSPA9P38646 679 aaKnown RBP22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 ARL4CP56559 192 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 SARNPP82979 210 aaKnown RBP22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 SRSF5Q13243 272 aaKnown RBP22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 STARD3Q14849 445 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 HIF1AQ16665 826 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 SYCP2LQ5T4T6 812 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 MCUQ8NE86 351 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 NT5MQ9NPB1 228 aa22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 AAR2Q9Y312 384 aaKnown RBP22.71■■□□□ 1.23
SYNGR3-202ENST00000562045 ANXA9O76027 345 aa22.7■■□□□ 1.22
SYNGR3-202ENST00000562045 HOXA6P31267 233 aa22.7■■□□□ 1.22
SYNGR3-202ENST00000562045 ZNF528Q3MIS6 628 aa22.7■■□□□ 1.22
SYNGR3-202ENST00000562045 RETSATQ6NUM9 610 aa22.7■■□□□ 1.22
SYNGR3-202ENST00000562045 CENPUQ71F23 418 aa22.7■■□□□ 1.22
SYNGR3-202ENST00000562045 HDXQ7Z353 690 aa22.7■■□□□ 1.22
SYNGR3-202ENST00000562045 PDIK1LQ8N165 341 aa22.7■■□□□ 1.22
SYNGR3-202ENST00000562045 STK40Q8N2I9 435 aa22.7■■□□□ 1.22
SYNGR3-202ENST00000562045 FRMD1Q8N878 549 aa22.7■■□□□ 1.22
SYNGR3-202ENST00000562045 PDCD7Q8N8D1 485 aaKnown RBP22.7■■□□□ 1.22
SYNGR3-202ENST00000562045 RBM15Q96T37 977 aaKnown RBP eCLIP22.7■■□□□ 1.22
SYNGR3-202ENST00000562045 FAM129BQ96TA1 746 aa22.7■■□□□ 1.22
SYNGR3-202ENST00000562045 SEPT3Q9UH03 358 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms