RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 KIF19Q2TAC6 998 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 HLA-BQ31612 363 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 SLC45A4Q5BKX6 768 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 AFMIDQ63HM1 303 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 DENND2CQ68D51 928 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 MFSD7Q6UXD7 560 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 TPCN2Q8NHX9 752 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 CXorf40AQ8TE69 158 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 SETD7Q8WTS6 366 aaKnown RBP10.24□□□□□ -0.77
HERC1-212ENST00000561348 SKA1Q96BD8 255 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 HAUS1Q96CS2 278 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 MS4A3Q96HJ5 214 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 LRIG1Q96JA1 1093 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 RNF157Q96PX1 679 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 RTKNQ9BST9 563 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 HEMGNQ9BXL5 484 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 HDAC8Q9BY41 377 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 CEP41Q9BYV8 373 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 LACRTQ9GZZ8 138 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 SUV39H2Q9H5I1 410 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 ATP13A3Q9H7F0 1226 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 IL21RQ9HBE5 538 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 CAPN10Q9HC96 672 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 PREBQ9HCU5 417 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 SALL4Q9UJQ4 1053 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 ANKRD6Q9Y2G4 727 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 REXO2Q9Y3B8 237 aaKnown RBP10.24□□□□□ -0.77
HERC1-212ENST00000561348 CHD5Q8TDI0 1954 aa10.24□□□□□ -0.77
HERC1-212ENST00000561348 SPTBN4Q9H254 2564 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 A0A0U1RQJ8 604 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 H0Y8X5 98 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 CDX4O14627 284 aaPredicted RBP10.23□□□□□ -0.77
HERC1-212ENST00000561348 MUSKO15146 869 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 MMP20O60882 483 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 ZRANB2O95218 330 aaKnown RBP eCLIP10.23□□□□□ -0.77
HERC1-212ENST00000561348 AKT2P31751 481 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 GARSP41250 739 aaKnown RBP10.23□□□□□ -0.77
HERC1-212ENST00000561348 MARCKSL1P49006 195 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 CCR5P51681 352 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 RPS21P63220 83 aaKnown RBP10.23□□□□□ -0.77
HERC1-212ENST00000561348 RFTN1Q14699 578 aaPredicted RBP10.23□□□□□ -0.77
HERC1-212ENST00000561348 PAFAH1B3Q15102 231 aaKnown RBP10.23□□□□□ -0.77
HERC1-212ENST00000561348 IFI16Q16666 785 aaKnown RBP10.23□□□□□ -0.77
HERC1-212ENST00000561348 CCDC157Q569K6 752 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 PPM1JQ5JR12 505 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 PEAR1Q5VY43 1037 aaPredicted RBP10.23□□□□□ -0.77
HERC1-212ENST00000561348 NAPEPLDQ6IQ20 393 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 PTAR1Q7Z6K3 402 aaPredicted RBP10.23□□□□□ -0.77
HERC1-212ENST00000561348 HORMAD1Q86X24 394 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 TXLNBQ8N3L3 684 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 PQLC3Q8N755 202 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 DEFB124Q8NES8 71 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 KIAA1524Q8TCG1 905 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 LGMNQ99538 433 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 SLC17A9Q9BYT1 436 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 KDM4CQ9H3R0 1056 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 GRPEL1Q9HAV7 217 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 RBM22Q9NW64 420 aaKnown RBP eCLIP10.23□□□□□ -0.77
HERC1-212ENST00000561348 SAE1Q9UBE0 346 aaPredicted RBP10.23□□□□□ -0.77
HERC1-212ENST00000561348 COQ6Q9Y2Z9 468 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 PCDHB9Q9Y5E1 797 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 PCDHGC4Q9Y5F7 938 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 FADS3Q9Y5Q0 445 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 CEP250Q9BV73 2442 aa10.23□□□□□ -0.77
HERC1-212ENST00000561348 A0A0A6YYK5 440 aaPredicted RBP10.22□□□□□ -0.77
HERC1-212ENST00000561348 CXorf51AA0A1B0GTR3 108 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 F5H423 210 aaPredicted RBP10.22□□□□□ -0.77
HERC1-212ENST00000561348 PRAMEF26H0Y7S4 382 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 KCNK1O00180 336 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 PSTPIP1O43586 416 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 NRDCO43847 1150 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 LZTS3O60299 673 aaPredicted RBP10.22□□□□□ -0.77
HERC1-212ENST00000561348 CST8O60676 142 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 CER1O95813 267 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 FTCDO95954 541 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 JCHAINP01591 159 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 CCNB1P14635 433 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 TIMP2P16035 220 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 MX2P20592 715 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 GRIA4P48058 902 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 NOVA1P51513 510 aaKnown RBP10.22□□□□□ -0.77
HERC1-212ENST00000561348 GALNT2Q10471 571 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 SLC10A2Q12908 348 aaPredicted RBP10.22□□□□□ -0.77
HERC1-212ENST00000561348 GRM3Q14832 879 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 ZNF284Q2VY69 593 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 TIGD7Q6NT04 549 aaPredicted RBP10.22□□□□□ -0.77
HERC1-212ENST00000561348 PSAPL1Q6NUJ1 521 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 ERAP2Q6P179 960 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 SPOCD1Q6ZMY3 1216 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 PEX26Q7Z412 305 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 KDELC2Q7Z4H8 507 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 TRIM69Q86WT6 500 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 TMEM139Q8IV31 216 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 PLPP6Q8IY26 295 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 CCDC13Q8IYE1 715 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 PGBD5Q8N414 524 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 FAM71BQ8TC56 605 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 KRT35Q92764 455 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 KLHDC7BQ96G42 594 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 ZNF599Q96NL3 588 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms