RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 XXYLT1Q8NBI6 393 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 FBXO15Q8NCQ5 510 aaPredicted RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 NSUN7Q8NE18 718 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 OR14K1Q8NGZ2 314 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 NCOA7Q8NI08 942 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 CEP76Q8TAP6 659 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 SHKBP1Q8TBC3 707 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 LPGAT1Q92604 370 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 ARHGEF26Q96DR7 871 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 MMABQ96EY8 250 aaPredicted RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 ELMOD3Q96FG2 381 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 CFAP36Q96G28 342 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 MEGF10Q96KG7 1140 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 CNDP1Q96KN2 507 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 RMDN2Q96LZ7 410 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 PWWP2AQ96N64 755 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 UROC1Q96N76 676 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 FIZ1Q96SL8 496 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 SIN3AQ96ST3 1273 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 CDRT15Q96T59 188 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 NAP1L3Q99457 506 aaPredicted RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 PARK7Q99497 189 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 SSX3Q99909 188 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 TCF25Q9BQ70 676 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 CPPED1Q9BRF8 314 aaPredicted RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 C17orf80Q9BSJ5 609 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 HERC2P3Q9BVR0 1158 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 TPPP3Q9BW30 176 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 IFT27Q9BW83 186 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 GTPBP2Q9BX10 602 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 STRA6Q9BX79 667 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 CARD11Q9BXL7 1154 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 CADM1Q9BY67 442 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 NUF2Q9BZD4 464 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 RTN4RQ9BZR6 473 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 TRIM2Q9C040 744 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 DDX47Q9H0S4 455 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 OR10A2Q9H208 303 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 C12orf65Q9H3J6 166 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 CXorf36Q9H7Y0 433 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 TMEM206Q9H813 350 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 MMRN2Q9H8L6 949 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 MRPL44Q9H9J2 332 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 GLOD4Q9HC38 313 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 SYTL2Q9HCH5 934 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 EPB41L5Q9HCM4 733 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 CHMP1AQ9HD42 196 aaPredicted RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 BPIFA1Q9NP55 256 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 KCNK9Q9NPC2 374 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 ASAH2Q9NR71 780 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 TLR8Q9NR97 1041 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 SLC6A13Q9NSD5 602 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 FARSBQ9NSD9 589 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 IARS2Q9NSE4 1012 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 ATAD3AQ9NVI7 634 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 FAM118AQ9NWS6 357 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 NINJ2Q9NZG7 142 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 C6orf203Q9P0P8 240 aaPredicted RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 SH3BP4Q9P0V3 963 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 CTNNAL1Q9UBT7 734 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 SLC23A1Q9UHI7 598 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 SERTAD3Q9UJW9 196 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 MTUS1Q9ULD2 1270 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 VPS4AQ9UN37 437 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 SLC8A2Q9UPR5 921 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 RCE1Q9Y256 329 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 SLC5A6Q9Y289 635 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 SSX2IPQ9Y2D8 614 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 TMED5Q9Y3A6 229 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 CMAHPQ9Y471 501 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 PCDHGA1Q9Y5H4 931 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 PCDHA5Q9Y5H7 936 aa2.09□□□□□ -2.07
RTF1-207ENST00000561076 COPG1Q9Y678 874 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 DDX49Q9Y6V7 483 aaKnown RBP2.09□□□□□ -2.07
RTF1-207ENST00000561076 NISCHQ9Y2I1 1504 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 LOC105369274A0A096LPK9 316 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 GPR75-ASB3A0A0A6YYF3 556 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 LOC102723532A0A0G2JNH3 316 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 DENND3A2RUS2 1198 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 C2orf78A6NCI8 922 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 OR6C68A6NDL8 312 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 TMEM247A6NEH6 219 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 TCAF2A6NFQ2 919 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 SLC9B1P1A6NJY1 282 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 E9PLN8 166 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 E2F3O00716 465 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 CES2O00748 559 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 DCLK1O15075 740 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 HCRTR2O43614 444 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 TLR2O60603 784 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 ADAM23O75077 832 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 SCGB2A1O75556 95 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 PRDM1O75626 825 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 RAD51DO75771 328 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 RHOBTB1O94844 696 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 KLHL18O94889 574 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 EPN2O95208 641 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 ZWINTO95229 277 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 HLA-DQA2P01906 255 aa2.08□□□□□ -2.08
RTF1-207ENST00000561076 CYP1A1P04798 512 aaPredicted RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms