RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 ADCY2Q08462 1091 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 NSUN2Q08J23 767 aaKnown RBP eCLIP12.22□□□□□ -0.45
USP8-212ENST00000560730 CCDC15Q0P6D6 951 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 FGL2Q14314 439 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 PUM1Q14671 1186 aaKnown RBP eCLIP12.22□□□□□ -0.45
USP8-212ENST00000560730 TAZQ16635 292 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 UAP1L1Q3KQV9 507 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 SLC9A4Q6AI14 798 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 NEK5Q6P3R8 708 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 TTC7BQ86TV6 843 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 PRPF39Q86UA1 669 aaKnown RBP12.22□□□□□ -0.45
USP8-212ENST00000560730 HORMAD1Q86X24 394 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 ZSWIM9Q86XI8 627 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 VSIG1Q86XK7 387 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 RFX6Q8HWS3 928 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 LRRC49Q8IUZ0 686 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 MINDY1Q8N5J2 469 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 TSGA13Q96PP4 275 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 MYOCQ99972 504 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 SUV39H2Q9H5I1 410 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 IL21RQ9HBE5 538 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 AASDHPPTQ9NRN7 309 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 DKK3Q9UBP4 350 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 ANKRD6Q9Y2G4 727 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 SNX11Q9Y5W9 270 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 DCHS1Q96JQ0 3298 aa12.22□□□□□ -0.45
USP8-212ENST00000560730 GRID2IPA4D2P6 1211 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 GOLGA6L6A8MZA4 724 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 KCNK3O14649 394 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 AREL1O15033 823 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 SLC31A1O15431 190 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 SYPP08247 313 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 KRT10P13645 584 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 CR2P20023 1033 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 MMP13P45452 471 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 GRIA4P48058 902 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 RENBPP51606 427 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 DYNLT1P63172 113 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 RACK1P63244 317 aaKnown RBP12.21□□□□□ -0.45
USP8-212ENST00000560730 ZNF235Q14590 738 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 IFI16Q16666 785 aaKnown RBP12.21□□□□□ -0.45
USP8-212ENST00000560730 KIF19Q2TAC6 998 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 TMEM259Q4ZIN3 620 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 MARC1Q5VT66 337 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 SPOCD1Q6ZMY3 1216 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 B4GALNT4Q76KP1 1039 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 TEX26Q8N6G2 289 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 LRRC57Q8N9N7 239 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 MAML1Q92585 1016 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 RAB7BQ96AH8 199 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 LGMNQ99538 433 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 RTKNQ9BST9 563 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 GRPEL1Q9HAV7 217 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 NOD2Q9HC29 1040 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 NT5MQ9NPB1 228 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 FZD3Q9NPG1 666 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 HEY1Q9Y5J3 304 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 ADGRG1Q9Y653 693 aa12.21□□□□□ -0.45
USP8-212ENST00000560730 TSPAN11A1L157 253 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 MACROD2A1Z1Q3 448 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 IGLON5A6NGN9 336 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 TRAFD1O14545 582 aaPredicted RBP12.2□□□□□ -0.46
USP8-212ENST00000560730 APOL1O14791 398 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 VILLO15195 856 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 MATN3O15232 486 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 PRKCGP05129 697 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 SDHBP21912 280 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 CCNCP24863 283 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 CD38P28907 300 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 ATXN3P54252 364 aaPredicted RBP12.2□□□□□ -0.46
USP8-212ENST00000560730 SEMG2Q02383 582 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 IHHQ14623 411 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 TEAD4Q15561 434 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 HLA-BQ31612 363 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 ODF2Q5BJF6 829 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 PRAMEF14Q5SWL7 426 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 KAZNQ674X7 775 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 NAPEPLDQ6IQ20 393 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 KATNAL2Q8IYT4 538 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 CCNYQ8ND76 341 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 KIAA1524Q8TCG1 905 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.2□□□□□ -0.46
USP8-212ENST00000560730 FEM1CQ96JP0 617 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 ZNF641Q96N77 438 aaPredicted RBP12.2□□□□□ -0.46
USP8-212ENST00000560730 NUDCD1Q96RS6 583 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 TUBGCP5Q96RT8 1024 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 MGME1Q9BQP7 344 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 MAK16Q9BXY0 300 aaKnown RBP12.2□□□□□ -0.46
USP8-212ENST00000560730 GAREM1Q9H706 876 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 ATP13A3Q9H7F0 1226 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 SAE1Q9UBE0 346 aaPredicted RBP12.2□□□□□ -0.46
USP8-212ENST00000560730 TPX2Q9ULW0 747 aaKnown RBP12.2□□□□□ -0.46
USP8-212ENST00000560730 PCDHGC4Q9Y5F7 938 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 ARID1BQ8NFD5 2236 aaPredicted RBP12.2□□□□□ -0.46
USP8-212ENST00000560730 H0Y8X5 98 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 NEMP1O14524 444 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 RAD51BO15315 384 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 TSPAN6O43657 245 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 CST8O60676 142 aa12.2□□□□□ -0.46
USP8-212ENST00000560730 MMP20O60882 483 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms