RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 GGA2Q9UJY4 613 aa6.59□□□□□ -1.35
HERC1-208ENST00000560462 CDH9Q9ULB4 789 aa6.59□□□□□ -1.35
HERC1-208ENST00000560462 SCN1AP35498 2009 aa6.59□□□□□ -1.36
HERC1-208ENST00000560462 A0A1W2PQU0 124 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 GOLGA8AA7E2F4 631 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 GOLGA8BA8MQT2 603 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 B4E171 279 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 E2F3O00716 465 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 GABRDO14764 452 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 STC2O76061 302 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 STK17BO94768 372 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 HTR3BO95264 441 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 CPNE6O95741 557 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 KLKB1P03952 638 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 PABPC1P11940 636 aaKnown RBP6.58□□□□□ -1.36
HERC1-208ENST00000560462 TSHRP16473 764 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 PTPN1P18031 435 aaKnown RBP6.58□□□□□ -1.36
HERC1-208ENST00000560462 CDC27P30260 824 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 TSPAN7P41732 249 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 THOP1P52888 689 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 METAP1P53582 386 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 CACNA2D1P54289 1103 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 CSNK1G2P78368 415 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 HNRNPUQ00839 825 aaKnown RBP eCLIP6.58□□□□□ -1.36
HERC1-208ENST00000560462 PDE1CQ14123 709 aaPredicted RBP6.58□□□□□ -1.36
HERC1-208ENST00000560462 ASIC2Q16515 512 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 ZNF284Q2VY69 593 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 TM4SF20Q53R12 229 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 ZNF468Q5VIY5 522 aaPredicted RBP6.58□□□□□ -1.36
HERC1-208ENST00000560462 MRM1Q6IN84 353 aaKnown RBP6.58□□□□□ -1.36
HERC1-208ENST00000560462 DUS1LQ6P1R4 473 aaKnown RBP6.58□□□□□ -1.36
HERC1-208ENST00000560462 XKRXQ6PP77 449 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 ZPBP2Q6X784 338 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 KYAT3Q6YP21 454 aaKnown RBP6.58□□□□□ -1.36
HERC1-208ENST00000560462 ZNF765Q7L2R6 523 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 PCDH19Q8TAB3 1148 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 SCAMP5Q8TAC9 235 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 TNFRSF25Q93038 417 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 MTFMTQ96DP5 389 aaKnown RBP6.58□□□□□ -1.36
HERC1-208ENST00000560462 MFSD3Q96ES6 412 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 CCDC74BQ96LY2 380 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 TBATAQ96M53 351 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 SPATA9Q9BWV2 254 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 LRRC2Q9BYS8 371 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 SLC13A1Q9BZW2 595 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 HAPLN2Q9GZV7 340 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 CLPBQ9H078 707 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 ING2Q9H160 280 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 TCEAL2Q9H3H9 227 aaPredicted RBP6.58□□□□□ -1.36
HERC1-208ENST00000560462 CRTAC1Q9NQ79 661 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 TMEM30AQ9NV96 361 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 FRRS1LQ9P0K9 344 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 VPS54Q9P1Q0 977 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 C2CD2Q9Y426 696 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 TMEM184BQ9Y519 407 aaPredicted RBP6.58□□□□□ -1.36
HERC1-208ENST00000560462 TCHHQ07283 1943 aa6.58□□□□□ -1.36
HERC1-208ENST00000560462 IGHV5-10-1A0A0J9YXX1 117 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 EDDM13A0A1B0GTR0 161 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 POM121BA6NF01 834 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 B2RBV5 119 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 F5H423 210 aaPredicted RBP6.57□□□□□ -1.36
HERC1-208ENST00000560462 CCNT1O60563 726 aaKnown RBP6.57□□□□□ -1.36
HERC1-208ENST00000560462 CREG1O75629 220 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 CEACAM4O75871 244 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 PNLIPP16233 465 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 GLB1P16278 677 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 HOXD9P28356 352 aaPredicted RBP6.57□□□□□ -1.36
HERC1-208ENST00000560462 GLRBP48167 497 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 PGFP49763 221 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 EIF2B5Q13144 721 aaKnown RBP6.57□□□□□ -1.36
HERC1-208ENST00000560462 ARHGEF7Q14155 803 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 PDLIM3Q53GG5 364 aaPredicted RBP6.57□□□□□ -1.36
HERC1-208ENST00000560462 AGBL4Q5VU57 503 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 HMBOX1Q6NT76 420 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 BHLHB9Q6PI77 547 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 LVRNQ6Q4G3 990 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 MEX3BQ6ZN04 569 aaKnown RBP6.57□□□□□ -1.36
HERC1-208ENST00000560462 SYT9Q86SS6 491 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 FAM35AQ86V20 835 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 HORMAD1Q86X24 394 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 SFR1Q86XK3 245 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 PHACTR4Q8IZ21 702 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 STK40Q8N2I9 435 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.57□□□□□ -1.36
HERC1-208ENST00000560462 MYCBPAPQ8TBZ2 947 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 THAP4Q8WY91 577 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 ZNF837Q96EG3 531 aaPredicted RBP6.57□□□□□ -1.36
HERC1-208ENST00000560462 SGSM3Q96HU1 749 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 BMFQ96LC9 184 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 CGRRF1Q99675 332 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 ZPBPQ9BS86 351 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 ELOVL4Q9GZR5 314 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 IL25Q9H293 177 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 KRT82Q9NSB4 513 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 OCIAD1Q9NX40 245 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 GPR34Q9UPC5 381 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 ATP8A1Q9Y2Q0 1164 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 HS3ST3A1Q9Y663 406 aa6.57□□□□□ -1.36
HERC1-208ENST00000560462 FAM187AA6NFU0 413 aa6.56□□□□□ -1.36
HERC1-208ENST00000560462 SERINC4A6NH21 518 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms