RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 CEP350Q5VT06 3117 aa10.14□□□□□ -0.79
LRRC28-216ENST00000559819 EME2A4GXA9 379 aaPredicted RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 OR51F1A6NGY5 319 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 KCNU1A8MYU2 1149 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 SMIM24O75264 130 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 PEX11BO96011 259 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 HAPLN1P10915 354 aaPredicted RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 CD86P42081 329 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 ZNF157P51786 506 aaPredicted RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 SLC12A2P55011 1212 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 MRPS22P82650 360 aaKnown RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 DSC2Q02487 901 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 DSC3Q14574 896 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 GSTA3Q16772 222 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 ALFQ53S48 1182 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 KIAA0930Q6ICG6 404 aaPredicted RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 TRIM67Q6ZTA4 783 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 ZNF280BQ86YH2 543 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 CPSF7Q8N684 471 aaKnown RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 RP9Q8TA86 221 aaKnown RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 PPP2R3CQ969Q6 453 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 PABPC5Q96DU9 382 aaKnown RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 NR1H4Q96RI1 486 aaPredicted RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 ARHGAP39Q9C0H5 1083 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 RRAGCQ9HB90 399 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 A0A0U1RQF3 1178 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 SDHDO14521 159 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 TBX18O95935 607 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 COL6A2P12110 1019 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 TSPAN8P19075 237 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 GRK4P32298 578 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 USP46P62068 366 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 MS4A2Q01362 244 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 YWHAHQ04917 246 aaPredicted RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 SLC10A7Q0GE19 358 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 CEACAM7Q14002 265 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 HNRNPDQ14103 355 aaKnown RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 ZNF423Q2M1K9 1284 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 GRAMD1BQ3KR37 738 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 C16orf89Q6UX73 402 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 ISLR2Q6UXK2 745 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 BNC2Q6ZN30 1099 aaPredicted RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 PTAR1Q7Z6K3 402 aaPredicted RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 CIR1Q86X95 450 aaPredicted RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 ZNF354CQ86Y25 554 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 LZTR1Q8N653 840 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 FAM156AQ8NDB6 213 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 ANKRD49Q8WVL7 239 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 TMA16Q96EY4 203 aaKnown RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 SUSD3Q96L08 255 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 UBE2OQ9C0C9 1292 aaKnown RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 MRM3Q9HC36 420 aaKnown RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 STK39Q9UEW8 545 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 DSEQ9UL01 958 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 KCTD3Q9Y597 815 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 TXNDC9O14530 226 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 ZNF623O75123 536 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 SOAT2O75908 522 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 PAMP19021 973 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 TCN1P20061 433 aaPredicted RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 ETFBP38117 255 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 ARSDP51689 593 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 PRKAA2P54646 552 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 TECRLQ5HYJ1 363 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 THEMIS2Q5TEJ8 643 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 TIGD7Q6NT04 549 aaPredicted RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 FBXL19Q6PCT2 694 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 BEND5Q7L4P6 421 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 SDCCAG8Q86SQ7 713 aaPredicted RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 TTC9BQ8N6N2 239 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 TRIB2Q92519 343 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 PHF21BQ96EK2 531 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 MRPL57Q9BQC6 102 aaKnown RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 CCDC28BQ9BUN5 200 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 ZBTB26Q9HCK0 441 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 TRMT13Q9NUP7 481 aaKnown RBP10.13□□□□□ -0.79
LRRC28-216ENST00000559819 TBC1D13Q9NVG8 400 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 ZDHHC7Q9NXF8 308 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 CLIC5Q9NZA1 410 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 VTI1BQ9UEU0 232 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 GABRQQ9UN88 632 aa10.13□□□□□ -0.79
LRRC28-216ENST00000559819 NLRC5Q86WI3 1866 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 SCN10AQ9Y5Y9 1956 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 A0A087X1B8 175 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 CAPN8A6NHC0 703 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 A8MT66 165 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 MT-CO1P00395 513 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 HMBSP08397 361 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 CCDC166P0CW27 439 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 CYBAP13498 195 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 HDCP19113 662 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 MLLT6P55198 1093 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-216ENST00000559819 SULT2A1Q06520 285 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 EFEMP1Q12805 493 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 PTPRCAPQ14761 206 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 PSMD5Q16401 504 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 PPP1R3AQ16821 1122 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 PIGGQ5H8A4 983 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 OR13J1Q8NGT2 312 aa10.12□□□□□ -0.79
LRRC28-216ENST00000559819 SOCS4Q8WXH5 440 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms