RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 FZD3Q9NPG1 666 aa17.81■□□□□ 0.44
SMAD3-210ENST00000559092 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.81■□□□□ 0.44
SMAD3-210ENST00000559092 UVRAGQ9P2Y5 699 aa17.81■□□□□ 0.44
SMAD3-210ENST00000559092 FRYQ5TBA9 3013 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 SSU72P8A0A1W2PR75 194 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 TSPAN11A1L157 253 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 DFFAO00273 331 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 FPGTO14772 594 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 INSIG1O15503 277 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 SPINT1O43278 529 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 TPM1P09493 284 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 CLDN2P57739 230 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 SLC25A11Q02978 314 aaKnown RBP17.8■□□□□ 0.44
SMAD3-210ENST00000559092 ELP6Q0PNE2 266 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 SLC18A3Q16572 532 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 HADHQ16836 314 aaKnown RBP17.8■□□□□ 0.44
SMAD3-210ENST00000559092 SMTNL2Q2TAL5 461 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 TMCO3Q6UWJ1 677 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 CCNI2Q6ZMN8 369 aaPredicted RBP17.8■□□□□ 0.44
SMAD3-210ENST00000559092 TMPRSS7Q7RTY8 843 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 EID2Q8N6I1 236 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 NPWQ8N729 165 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 NETO2Q8NC67 525 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 HSPH1Q92598 858 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 CSPG4P5Q96PW8 444 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 MYOCQ99972 504 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 C1QTNF7Q9BXJ2 289 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 CALN1Q9BXU9 219 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 SP110Q9HB58 689 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 GPR27Q9NS67 375 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 RCOR3Q9P2K3 495 aaPredicted RBP17.8■□□□□ 0.44
SMAD3-210ENST00000559092 IPO11Q9UI26 975 aaKnown RBP17.8■□□□□ 0.44
SMAD3-210ENST00000559092 SPEGQ15772 3267 aa17.8■□□□□ 0.44
SMAD3-210ENST00000559092 CHD5Q8TDI0 1954 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 POM121BA6NF01 834 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 C1QTNF9BB2RNN3 333 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 ENC1O14682 589 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 RAD51BO15315 384 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 H2AFZP0C0S5 128 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 C1QTNF9P0C862 333 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 TCF4P15884 667 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 XPAP23025 273 aaPredicted RBP17.79■□□□□ 0.44
SMAD3-210ENST00000559092 RENBPP51606 427 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 UGP2Q16851 508 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 ASTE1Q2TB18 679 aaPredicted RBP17.79■□□□□ 0.44
SMAD3-210ENST00000559092 TMEM52BQ4KMG9 183 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 H2AFVQ71UI9 128 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 SRLQ86TD4 932 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 VSTM4Q8IW00 320 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 GALNT15Q8N3T1 639 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 TSEN2Q8NCE0 465 aaKnown RBP17.79■□□□□ 0.44
SMAD3-210ENST00000559092 ZNF564Q8TBZ8 553 aaPredicted RBP17.79■□□□□ 0.44
SMAD3-210ENST00000559092 CXorf40AQ8TE69 158 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 TSC1Q92574 1164 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 CENPTQ96BT3 561 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 BTBD6Q96KE9 485 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 EXOC2Q96KP1 924 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 CNDP2Q96KP4 475 aaKnown RBP17.79■□□□□ 0.44
SMAD3-210ENST00000559092 PSKH2Q96QS6 385 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 CINPQ9BW66 212 aaPredicted RBP17.79■□□□□ 0.44
SMAD3-210ENST00000559092 ATP13A3Q9H7F0 1226 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 SEPT3Q9UH03 358 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 ITM2BQ9Y287 266 aa17.79■□□□□ 0.44
SMAD3-210ENST00000559092 NYNRINQ9P2P1 1898 aaKnown RBP17.79■□□□□ 0.44
SMAD3-210ENST00000559092 SPTY2D1-AS1A0A0U1RR47 76 aa17.78■□□□□ 0.44
SMAD3-210ENST00000559092 TOR1BO14657 336 aa17.78■□□□□ 0.44
SMAD3-210ENST00000559092 BUB1BO60566 1050 aaPredicted RBP17.78■□□□□ 0.44
SMAD3-210ENST00000559092 TM7SF2O76062 418 aa17.78■□□□□ 0.44
SMAD3-210ENST00000559092 AMPD1P23109 780 aa17.78■□□□□ 0.44
SMAD3-210ENST00000559092 DGKAP23743 735 aa17.78■□□□□ 0.44
SMAD3-210ENST00000559092 SERPINB6P35237 376 aa17.78■□□□□ 0.44
SMAD3-210ENST00000559092 ZNF211Q13398 564 aaPredicted RBP17.78■□□□□ 0.44
SMAD3-210ENST00000559092 SMAD1Q15797 465 aaKnown RBP17.78■□□□□ 0.44
SMAD3-210ENST00000559092 CFAP58Q5T655 872 aa17.78■□□□□ 0.44
SMAD3-210ENST00000559092 ERAP2Q6P179 960 aa17.78■□□□□ 0.44
SMAD3-210ENST00000559092 PTAR1Q7Z6K3 402 aaPredicted RBP17.78■□□□□ 0.44
SMAD3-210ENST00000559092 LRRC49Q8IUZ0 686 aa17.78■□□□□ 0.44
SMAD3-210ENST00000559092 SLC22A18ASQ8N1D0 253 aa17.78■□□□□ 0.44
SMAD3-210ENST00000559092 SLC25A45Q8N413 288 aa17.78■□□□□ 0.44
SMAD3-210ENST00000559092 FAM71BQ8TC56 605 aa17.78■□□□□ 0.44
SMAD3-210ENST00000559092 CTNNBL1Q8WYA6 563 aaPredicted RBP17.78■□□□□ 0.44
SMAD3-210ENST00000559092 DEF6Q9H4E7 631 aa17.78■□□□□ 0.44
SMAD3-210ENST00000559092 PCDH18Q9HCL0 1135 aa17.78■□□□□ 0.44
SMAD3-210ENST00000559092 GGT7Q9UJ14 662 aa17.78■□□□□ 0.44
SMAD3-210ENST00000559092 CFAP69A5D8W1 941 aa17.77■□□□□ 0.44
SMAD3-210ENST00000559092 GOLGA8CPA6NN73 597 aa17.77■□□□□ 0.44
SMAD3-210ENST00000559092 MMP20O60882 483 aa17.77■□□□□ 0.44
SMAD3-210ENST00000559092 PROSCO94903 275 aa17.77■□□□□ 0.44
SMAD3-210ENST00000559092 PIGNO95427 931 aa17.77■□□□□ 0.44
SMAD3-210ENST00000559092 SERPINA4P29622 427 aa17.77■□□□□ 0.44
SMAD3-210ENST00000559092 HSPA9P38646 679 aaKnown RBP17.77■□□□□ 0.44
SMAD3-210ENST00000559092 PFN3P60673 137 aa17.77■□□□□ 0.44
SMAD3-210ENST00000559092 AP1S1P61966 158 aa17.77■□□□□ 0.44
SMAD3-210ENST00000559092 HNRNPKP61978 463 aaKnown RBP eCLIP17.77■□□□□ 0.449e-8■■■■□ 22
SMAD3-210ENST00000559092 YPEL5P62699 121 aa17.77■□□□□ 0.44
SMAD3-210ENST00000559092 POLR2LP62875 67 aaKnown RBP17.77■□□□□ 0.44
SMAD3-210ENST00000559092 ILKQ13418 452 aa17.77■□□□□ 0.44
SMAD3-210ENST00000559092 KRT81Q14533 505 aa17.77■□□□□ 0.44
SMAD3-210ENST00000559092 LBRQ14739 615 aaKnown RBP17.77■□□□□ 0.44
SMAD3-210ENST00000559092 HS1BP3Q53T59 392 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms