RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 LINC00523Q86TU6 105 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 UBALD2Q8IYN6 164 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 CHPFQ8IZ52 775 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 GJD3Q8N144 294 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 CHST14Q8NCH0 376 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 FEM1CQ96JP0 617 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 TUBGCP5Q96RT8 1024 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 TRIB3Q96RU7 358 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 TDRD1Q9BXT4 1180 aaKnown RBP18.26■□□□□ 0.51
CLPX-203ENST00000558958 XAB2Q9HCS7 855 aaKnown RBP18.26■□□□□ 0.51
CLPX-203ENST00000558958 ARIH1Q9Y4X5 557 aaPredicted RBP18.26■□□□□ 0.51
CLPX-203ENST00000558958 RAI2Q9Y5P3 530 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 STON1Q9Y6Q2 735 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 TCF20Q9UGU0 1960 aaKnown RBP18.26■□□□□ 0.51
CLPX-203ENST00000558958 PPFIA2O75334 1257 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 FAM153BP0C7A2 387 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 MLNP12872 115 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 MAGEA3P43357 314 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 ARL4CP56559 192 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 TRAF2Q12933 501 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 CBLBQ13191 982 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 GRM3Q14832 879 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 HIF1AQ16665 826 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 FAM153CQ494X1 144 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 FBXO43Q4G163 708 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 C2orf27AQ580R0 203 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 FNBP1LQ5T0N5 605 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 DENND5AQ6IQ26 1287 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 CAMK1DQ8IU85 385 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 OR52K1Q8NGK4 314 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 APOL2Q9BQE5 337 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 HEPHQ9BQS7 1158 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 TSPYL1Q9H0U9 437 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 ATP13A3Q9H7F0 1226 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 ARNT2Q9HBZ2 717 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 CASS4Q9NQ75 786 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 SUN2Q9UH99 717 aa18.26■□□□□ 0.51
CLPX-203ENST00000558958 KRBA1A5PL33 1030 aa18.25■□□□□ 0.51
CLPX-203ENST00000558958 TRAFD1O14545 582 aaPredicted RBP18.25■□□□□ 0.51
CLPX-203ENST00000558958 HTRA2O43464 458 aaPredicted RBP18.25■□□□□ 0.51
CLPX-203ENST00000558958 SOCS5O75159 536 aa18.25■□□□□ 0.51
CLPX-203ENST00000558958 SIN3BO75182 1162 aa18.25■□□□□ 0.51
CLPX-203ENST00000558958 AVILO75366 819 aa18.25■□□□□ 0.51
CLPX-203ENST00000558958 PIGNO95427 931 aa18.25■□□□□ 0.51
CLPX-203ENST00000558958 PRLP01236 227 aa18.25■□□□□ 0.51
CLPX-203ENST00000558958 EPHX1P07099 455 aa18.25■□□□□ 0.51
CLPX-203ENST00000558958 CA4P22748 312 aa18.25■□□□□ 0.51
CLPX-203ENST00000558958 MRPS21P82921 87 aaKnown RBP18.25■□□□□ 0.51
CLPX-203ENST00000558958 BCL2L1Q07817 233 aa18.25■□□□□ 0.51
CLPX-203ENST00000558958 BRD3Q15059 726 aa18.25■□□□□ 0.51
CLPX-203ENST00000558958 PDIK1LQ8N165 341 aa18.25■□□□□ 0.51
CLPX-203ENST00000558958 ZNF687Q8N1G0 1237 aa18.25■□□□□ 0.51
CLPX-203ENST00000558958 AENQ8WTP8 325 aaKnown RBP18.25■□□□□ 0.51
CLPX-203ENST00000558958 IFT43Q96FT9 208 aa18.25■□□□□ 0.51
CLPX-203ENST00000558958 PHACTR1Q9C0D0 580 aa18.25■□□□□ 0.51
CLPX-203ENST00000558958 ZDHHC6Q9H6R6 413 aa18.25■□□□□ 0.51
CLPX-203ENST00000558958 CD320Q9NPF0 282 aa18.25■□□□□ 0.51
CLPX-203ENST00000558958 FBXL21Q9UKT6 434 aa18.25■□□□□ 0.51
CLPX-203ENST00000558958 CHKBQ9Y259 395 aa18.25■□□□□ 0.51
CLPX-203ENST00000558958 CCDC151A5D8V7 595 aa18.24■□□□□ 0.51
CLPX-203ENST00000558958 FZD6O60353 706 aa18.24■□□□□ 0.51
CLPX-203ENST00000558958 NDST3O95803 873 aa18.24■□□□□ 0.51
CLPX-203ENST00000558958 ATXN1LP0C7T5 689 aaKnown RBP18.24■□□□□ 0.51
CLPX-203ENST00000558958 SERPINA4P29622 427 aa18.24■□□□□ 0.51
CLPX-203ENST00000558958 NTSR1P30989 418 aa18.24■□□□□ 0.51
CLPX-203ENST00000558958 CHRNA4P43681 627 aa18.24■□□□□ 0.51
CLPX-203ENST00000558958 STARD6P59095 220 aa18.24■□□□□ 0.51
CLPX-203ENST00000558958 CDH17Q12864 832 aa18.24■□□□□ 0.51
CLPX-203ENST00000558958 ELAVL3Q14576 367 aaKnown RBP18.24■□□□□ 0.51
CLPX-203ENST00000558958 SLC1A5Q15758 541 aa18.24■□□□□ 0.51
CLPX-203ENST00000558958 MSS51Q4VC12 460 aa18.24■□□□□ 0.51
CLPX-203ENST00000558958 DNAAF3Q8N9W5 541 aa18.24■□□□□ 0.51
CLPX-203ENST00000558958 IL17RCQ8NAC3 791 aa18.24■□□□□ 0.51
CLPX-203ENST00000558958 SHDQ96IW2 340 aa18.24■□□□□ 0.51
CLPX-203ENST00000558958 LRIG1Q96JA1 1093 aa18.24■□□□□ 0.51
CLPX-203ENST00000558958 ZNF641Q96N77 438 aaPredicted RBP18.24■□□□□ 0.51
CLPX-203ENST00000558958 GABRG3Q99928 467 aa18.24■□□□□ 0.51
CLPX-203ENST00000558958 PRSS16Q9NQE7 514 aa18.24■□□□□ 0.51
CLPX-203ENST00000558958 IL36AQ9UHA7 158 aa18.24■□□□□ 0.51
CLPX-203ENST00000558958 NDRG2Q9UN36 371 aaKnown RBP18.24■□□□□ 0.51
CLPX-203ENST00000558958 WASF2Q9Y6W5 498 aa18.24■□□□□ 0.51
CLPX-203ENST00000558958 E7ESA3 106 aa18.23■□□□□ 0.51
CLPX-203ENST00000558958 AP3B1O00203 1094 aa18.23■□□□□ 0.51
CLPX-203ENST00000558958 EIF3HO15372 352 aaKnown RBP eCLIP18.23■□□□□ 0.51
CLPX-203ENST00000558958 PGLSO95336 258 aa18.23■□□□□ 0.51
CLPX-203ENST00000558958 CTSLP07711 333 aa18.23■□□□□ 0.51
CLPX-203ENST00000558958 PDHA1P08559 390 aa18.23■□□□□ 0.51
CLPX-203ENST00000558958 HLA-DPA1P20036 260 aa18.23■□□□□ 0.51
CLPX-203ENST00000558958 WASP42768 502 aa18.23■□□□□ 0.51
CLPX-203ENST00000558958 TNNT3P45378 269 aaPredicted RBP18.23■□□□□ 0.51
CLPX-203ENST00000558958 MTM1Q13496 603 aa18.23■□□□□ 0.51
CLPX-203ENST00000558958 SIRPB2Q5JXA9 342 aa18.23■□□□□ 0.51
CLPX-203ENST00000558958 ARMC12Q5T9G4 340 aa18.23■□□□□ 0.51
CLPX-203ENST00000558958 EMBQ6PCB8 327 aa18.23■□□□□ 0.51
CLPX-203ENST00000558958 CENPUQ71F23 418 aa18.23■□□□□ 0.51
CLPX-203ENST00000558958 TRMT11Q7Z4G4 463 aaKnown RBP18.23■□□□□ 0.51
CLPX-203ENST00000558958 CCDC25Q86WR0 208 aa18.23■□□□□ 0.51
CLPX-203ENST00000558958 STK40Q8N2I9 435 aa18.23■□□□□ 0.51
CLPX-203ENST00000558958 SLC25A41Q8N5S1 370 aa18.23■□□□□ 0.51
CLPX-203ENST00000558958 GRIN3AQ8TCU5 1115 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms