RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 ZNF66Q6ZN08 573 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 DEF8Q6ZN54 512 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 KDELC2Q7Z4H8 507 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 SERPINA11Q86U17 422 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 ARHGAP12Q8IWW6 846 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 ADGRF2Q8IZF7 708 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 TAGAPQ8N103 731 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 OR4N2Q8NGD1 307 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 GTF3C6Q969F1 213 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 RNF183Q96D59 192 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 CALML4Q96GE6 196 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 PGAM5Q96HS1 289 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 CXorf56Q9H5V9 222 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 ZNF304Q9HCX3 659 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 MLXIPLQ9NP71 852 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 PNRC2Q9NPJ4 139 aaKnown RBP4.64□□□□□ -1.67
CASC4-206ENST00000558847 TMEM45AQ9NWC5 275 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 SEL1LQ9UBV2 794 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 AAR2Q9Y312 384 aaKnown RBP4.64□□□□□ -1.67
CASC4-206ENST00000558847 FAM96BQ9Y3D0 163 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 SNX8Q9Y5X2 465 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 PASKQ96RG2 1323 aa4.64□□□□□ -1.67
CASC4-206ENST00000558847 TRBV5-7A0A0A0MS05 114 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 FAM237BA0A1B0GVD1 139 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 TYW5A2RUC4 315 aaKnown RBP4.63□□□□□ -1.67
CASC4-206ENST00000558847 CBY3A6NI87 242 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 MTA2O94776 668 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 STARD3NLO95772 234 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 MT-CYBP00156 380 aaPredicted RBP4.63□□□□□ -1.67
CASC4-206ENST00000558847 ENO3P13929 434 aaPredicted RBP4.63□□□□□ -1.67
CASC4-206ENST00000558847 EPHB2P29323 1055 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 ICAM3P32942 547 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 TTKP33981 857 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 NLRP5P59047 1200 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 ID2Q02363 134 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 SRSF4Q08170 494 aaKnown RBP4.63□□□□□ -1.67
CASC4-206ENST00000558847 OLIG2Q13516 323 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 SHBQ15464 509 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 SYTL3Q4VX76 610 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 MFSD4BQ5TF39 518 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 HMBOX1Q6NT76 420 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 KLHL35Q6PF15 583 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 ZNF793Q6ZN11 406 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 KRBA2Q6ZNG9 492 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 MOB3CQ70IA8 216 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 CAMK1DQ8IU85 385 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 SRRM1Q8IYB3 904 aaKnown RBP4.63□□□□□ -1.67
CASC4-206ENST00000558847 TEX11Q8IYF3 940 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 OR8H2Q8N162 312 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 SRBD1Q8N5C6 995 aaKnown RBP4.63□□□□□ -1.67
CASC4-206ENST00000558847 SLC44A5Q8NCS7 719 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 KAT2AQ92830 837 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 JAKMIP2Q96AA8 810 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 ZNF419Q96HQ0 510 aaPredicted RBP4.63□□□□□ -1.67
CASC4-206ENST00000558847 CMTM3Q96MX0 182 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 BBS4Q96RK4 519 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 SERINC2Q96SA4 455 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 SIN3AQ96ST3 1273 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 SH2D3AQ9BRG2 576 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 WDR83Q9BRX9 315 aaKnown RBP4.63□□□□□ -1.67
CASC4-206ENST00000558847 RRP7BPQ9NSQ0 103 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 ADD3Q9UEY8 706 aaKnown RBP4.63□□□□□ -1.67
CASC4-206ENST00000558847 UTS2RQ9UKP6 389 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 INTS6Q9UL03 887 aaKnown RBP4.63□□□□□ -1.67
CASC4-206ENST00000558847 ZNF215Q9UL58 517 aaPredicted RBP4.63□□□□□ -1.67
CASC4-206ENST00000558847 SESN1Q9Y6P5 492 aa4.63□□□□□ -1.67
CASC4-206ENST00000558847 RUSC2Q8N2Y8 1516 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 SYNDIG1LA6NDD5 238 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 GAGE12JA6NER3 117 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 DNAJC9-AS1A6NH13 148 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 KRTAP29-1A8MX34 341 aaPredicted RBP4.62□□□□□ -1.67
CASC4-206ENST00000558847 NDUFS3O75489 264 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 WNT1P04628 370 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 KRT10P13645 584 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 PORP16435 677 aaPredicted RBP4.62□□□□□ -1.67
CASC4-206ENST00000558847 CTPS1P17812 591 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 ITGB6P18564 788 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 RFC1P35251 1148 aaPredicted RBP4.62□□□□□ -1.67
CASC4-206ENST00000558847 PBX3P40426 434 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 TFAP4Q01664 338 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 SLC18A2Q05940 514 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 MED22Q15528 200 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 TCTN1Q2MV58 587 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 PLEKHO1Q53GL0 409 aaPredicted RBP4.62□□□□□ -1.67
CASC4-206ENST00000558847 TTI2Q6NXR4 508 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 TSSK4Q6SA08 328 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 FAM83HQ6ZRV2 1179 aaPredicted RBP4.62□□□□□ -1.67
CASC4-206ENST00000558847 KRT74Q7RTS7 529 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 KIAA2013Q8IYS2 634 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 BICD2Q8TD16 824 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 SCNM1Q9BWG6 230 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 HEMGNQ9BXL5 484 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 FTOQ9C0B1 505 aaKnown RBP eCLIP4.62□□□□□ -1.67
CASC4-206ENST00000558847 SMYD2Q9NRG4 433 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 FLRT1Q9NZU1 646 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 RAP2CQ9Y3L5 183 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 CAPN7Q9Y6W3 813 aa4.62□□□□□ -1.67
CASC4-206ENST00000558847 A0A0A0MQY5 61 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 hCG_1807616A0A1W2PRN6 198 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 AGAP14A8MT82 685 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms