RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 TLK1Q9UKI8 766 aa12.04□□□□□ -0.48
SMAD3-206ENST00000558739 MKRN2OSH3BPM6 223 aa12.03□□□□□ -0.48
SMAD3-206ENST00000558739 NEMP1O14524 444 aa12.03□□□□□ -0.48
SMAD3-206ENST00000558739 HGSO14964 777 aaPredicted RBP12.03□□□□□ -0.48
SMAD3-206ENST00000558739 MMP20O60882 483 aa12.03□□□□□ -0.48
SMAD3-206ENST00000558739 SORBS2O94875 1100 aaKnown RBP12.03□□□□□ -0.48
SMAD3-206ENST00000558739 TRUB2O95900 331 aaKnown RBP12.03□□□□□ -0.48
SMAD3-206ENST00000558739 PDCP20941 246 aa12.03□□□□□ -0.48
SMAD3-206ENST00000558739 BRD2P25440 801 aaKnown RBP12.03□□□□□ -0.48
SMAD3-206ENST00000558739 AUHQ13825 339 aaKnown RBP12.03□□□□□ -0.48
SMAD3-206ENST00000558739 ARHGEF7Q14155 803 aa12.03□□□□□ -0.48
SMAD3-206ENST00000558739 C14orf28Q4W4Y0 310 aa12.03□□□□□ -0.48
SMAD3-206ENST00000558739 RABGAP1LQ5R372 815 aa12.03□□□□□ -0.48
SMAD3-206ENST00000558739 TTC39BQ5VTQ0 682 aaPredicted RBP12.03□□□□□ -0.48
SMAD3-206ENST00000558739 NKAIN2Q5VXU1 208 aa12.03□□□□□ -0.48
SMAD3-206ENST00000558739 GKN2Q86XP6 184 aa12.03□□□□□ -0.48
SMAD3-206ENST00000558739 FAM129CQ86XR2 697 aa12.03□□□□□ -0.48
SMAD3-206ENST00000558739 CCDC150Q8NCX0 1101 aa12.03□□□□□ -0.48
SMAD3-206ENST00000558739 TMEM174Q8WUU8 243 aa12.03□□□□□ -0.48
SMAD3-206ENST00000558739 DDA1Q9BW61 102 aa12.03□□□□□ -0.48
SMAD3-206ENST00000558739 SPRY4Q9C004 299 aa12.03□□□□□ -0.48
SMAD3-206ENST00000558739 ZDHHC6Q9H6R6 413 aa12.03□□□□□ -0.48
SMAD3-206ENST00000558739 TMEM8AQ9HCN3 771 aa12.03□□□□□ -0.48
SMAD3-206ENST00000558739 COQ6Q9Y2Z9 468 aa12.03□□□□□ -0.48
SMAD3-206ENST00000558739 OR1A2Q9Y585 309 aa12.03□□□□□ -0.48
SMAD3-206ENST00000558739 C16orf96A6NNT2 1141 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 TSPAN6O43657 245 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 DIAPH2O60879 1101 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 RASGRP1O95267 797 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 TCN2P20062 427 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 DNA2P51530 1060 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 CCNHP51946 323 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-206ENST00000558739 SRP54P61011 504 aaKnown RBP12.02□□□□□ -0.49
SMAD3-206ENST00000558739 YPEL5P62699 121 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 DPYDQ12882 1025 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 EIF4EBP2Q13542 120 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-206ENST00000558739 TAF5Q15542 800 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 KLHL40Q2TBA0 621 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 ALFQ53S48 1182 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 FOXR2Q6PJQ5 311 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 LCLAT1Q6UWP7 414 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 ENPP7Q6UWV6 458 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 PIM3Q86V86 326 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 NLGN4XQ8N0W4 816 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 UBR7Q8N806 425 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 FAM46DQ8NEK8 389 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 NLGN4YQ8NFZ3 816 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-206ENST00000558739 OR7D4Q8NG98 312 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 OR6C4Q8NGE1 309 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 ASB12Q8WXK4 309 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 KIAA1143Q96AT1 154 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-206ENST00000558739 RTP4Q96DX8 246 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 MOCOSQ96EN8 888 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 RBM15Q96T37 977 aaKnown RBP eCLIP12.02□□□□□ -0.49
SMAD3-206ENST00000558739 WRAP53Q9BUR4 548 aaKnown RBP12.02□□□□□ -0.49
SMAD3-206ENST00000558739 SRRTQ9BXP5 876 aaKnown RBP12.02□□□□□ -0.49
SMAD3-206ENST00000558739 TRIM55Q9BYV6 548 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 TM6SF2Q9BZW4 377 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 LRRC27Q9C0I9 530 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 MRPL40Q9NQ50 206 aaKnown RBP12.02□□□□□ -0.49
SMAD3-206ENST00000558739 SLC39A1Q9NY26 324 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 AKAP7Q9P0M2 348 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-206ENST00000558739 SMC3Q9UQE7 1217 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 TBC1D30Q9Y2I9 924 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 FRMD4BQ9Y2L6 1034 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 FCF1Q9Y324 198 aaKnown RBP12.02□□□□□ -0.49
SMAD3-206ENST00000558739 SNX10Q9Y5X0 201 aa12.02□□□□□ -0.49
SMAD3-206ENST00000558739 CAPN5O15484 640 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-206ENST00000558739 KLRC4O43908 158 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 PDIA4P13667 645 aaKnown RBP12.01□□□□□ -0.49
SMAD3-206ENST00000558739 PNLIPP16233 465 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 ALDH4A1P30038 563 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 MXI1P50539 228 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 BLKP51451 505 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 AMPD3Q01432 767 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 CUL2Q13617 745 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 SPECC1LQ69YQ0 1117 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 OGFOD3Q6PK18 319 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 TAF8Q7Z7C8 310 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 NRSN1Q8IZ57 195 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 BMPERQ8N8U9 685 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 ATP6V0D2Q8N8Y2 350 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 FBXL13Q8NEE6 735 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 OR1E3Q8WZA6 343 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 HEPHQ9BQS7 1158 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 C2orf49Q9BVC5 232 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-206ENST00000558739 FAM204AQ9H8W3 233 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 FGF22Q9HCT0 170 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 APMAPQ9HDC9 416 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 RAB20Q9NX57 234 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 KLQ9UEF7 1012 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 HS3ST4Q9Y661 456 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 DOCK4Q8N1I0 1966 aa12.01□□□□□ -0.49
SMAD3-206ENST00000558739 I6L893 689 aaPredicted RBP12□□□□□ -0.49
SMAD3-206ENST00000558739 PDXKO00764 312 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 AREL1O15033 823 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 NUDT21O43809 227 aaKnown RBP12□□□□□ -0.49
SMAD3-206ENST00000558739 RFPL1O75677 317 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 FBXO21O94952 628 aa12□□□□□ -0.49
SMAD3-206ENST00000558739 ADCY5O95622 1261 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms