RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 HNRNPLP14866 589 aaKnown RBP eCLIP17.03■□□□□ 0.32
SNX1-203ENST00000558040 GRIA1P42261 906 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 MAGEA4P43358 317 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 NPY2RP49146 381 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 PMS2P54278 862 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 SESN2P58004 480 aaPredicted RBP17.03■□□□□ 0.32
SNX1-203ENST00000558040 PON2Q15165 354 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 SLC1A5Q15758 541 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 HNRNPA1L2Q32P51 320 aaKnown RBP17.03■□□□□ 0.32
SNX1-203ENST00000558040 SLC44A4Q53GD3 710 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 BEND6Q5SZJ8 279 aaPredicted RBP17.03■□□□□ 0.32
SNX1-203ENST00000558040 DPY19L3Q6ZPD9 716 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 TRMT10CQ7L0Y3 403 aaKnown RBP17.03■□□□□ 0.32
SNX1-203ENST00000558040 KDELC2Q7Z4H8 507 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 SFTPA1Q8IWL2 248 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 ZBED8Q8IZ13 594 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 MREGQ8N565 214 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 PAF1Q8N7H5 531 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 ZNF513Q8N8E2 541 aaPredicted RBP17.03■□□□□ 0.32
SNX1-203ENST00000558040 OR2A12Q8NGT7 310 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 OR6K2Q8NGY2 324 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 ATXN2LQ8WWM7 1075 aaKnown RBP17.03■□□□□ 0.32
SNX1-203ENST00000558040 LRIG1Q96JA1 1093 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 TTC25Q96NG3 672 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 HEPHQ9BQS7 1158 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 TMEM245Q9H330 911 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 ZDHHC6Q9H6R6 413 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 ARNT2Q9HBZ2 717 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 FBRSL1Q9HCM7 1045 aaKnown RBP17.03■□□□□ 0.32
SNX1-203ENST00000558040 SUN2Q9UH99 717 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 MUC22E2RYF6 1773 aaPredicted RBP17.02■□□□□ 0.32
SNX1-203ENST00000558040 A0A1W2PQ67 120 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 ALOX15BO15296 676 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 AVILO75366 819 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 RPL26P61254 145 aaKnown RBP17.02■□□□□ 0.32
SNX1-203ENST00000558040 TRAF2Q12933 501 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 OLIG2Q13516 323 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 IHHQ14623 411 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 MLF2Q15773 248 aaPredicted RBP17.02■□□□□ 0.32
SNX1-203ENST00000558040 MSS51Q4VC12 460 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 CCDC38Q502W7 563 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 SPDYCQ5MJ68 293 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 CFAP58Q5T655 872 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 ARMC12Q5T9G4 340 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 ARMC3Q5W041 872 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 EGFLAMQ63HQ2 1017 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 TPRG1Q6ZUI0 275 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 TRMT11Q7Z4G4 463 aaKnown RBP17.02■□□□□ 0.32
SNX1-203ENST00000558040 CCNJLQ8IV13 435 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 SLC25A41Q8N5S1 370 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 PYROXD1Q8WU10 500 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 PDCD6IPQ8WUM4 868 aaKnown RBP17.02■□□□□ 0.32
SNX1-203ENST00000558040 FAM3CQ92520 227 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 ZNF641Q96N77 438 aaPredicted RBP17.02■□□□□ 0.32
SNX1-203ENST00000558040 NAT9Q9BTE0 207 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 OSBPL1AQ9BXW6 950 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 TXLNGYQ9BZA5 131 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 IL22Q9GZX6 179 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 SAMD15Q9P1V8 674 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 RPL26L1Q9UNX3 145 aaKnown RBP17.02■□□□□ 0.32
SNX1-203ENST00000558040 CHKBQ9Y259 395 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 PCDHGC4Q9Y5F7 938 aa17.02■□□□□ 0.32
SNX1-203ENST00000558040 C19orf67A6NJJ6 358 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 K7EQS6 105 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 ALADP13716 330 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 MGAT1P26572 445 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 IL12RB1P42701 662 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 PRKCQQ04759 706 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 MTM1Q13496 603 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 FBXO43Q4G163 708 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 SIRPB2Q5JXA9 342 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 DENND5AQ6IQ26 1287 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 SDE2Q6IQ49 451 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 FSTL4Q6MZW2 842 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 CASC4Q6P4E1 433 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 CAMK1DQ8IU85 385 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 CHPFQ8IZ52 775 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 FBXO36Q8NEA4 188 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 UBLCP1Q8WVY7 318 aaPredicted RBP17.01■□□□□ 0.31
SNX1-203ENST00000558040 OR8D1Q8WZ84 308 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 PTPRN2Q92932 1015 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 RMDN1Q96DB5 314 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 STAMBPL1Q96FJ0 436 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 TRIB3Q96RU7 358 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 CDC42EP4Q9H3Q1 356 aaKnown RBP17.01■□□□□ 0.31
SNX1-203ENST00000558040 PIH1D1Q9NWS0 290 aaKnown RBP17.01■□□□□ 0.31
SNX1-203ENST00000558040 IL36AQ9UHA7 158 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 MAD1L1Q9Y6D9 718 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 TEX264Q9Y6I9 313 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 STON1Q9Y6Q2 735 aa17.01■□□□□ 0.31
SNX1-203ENST00000558040 MAGEB16A2A368 324 aa17■□□□□ 0.31
SNX1-203ENST00000558040 HTRA2O43464 458 aaPredicted RBP17■□□□□ 0.31
SNX1-203ENST00000558040 BANF1O75531 89 aa17■□□□□ 0.31
SNX1-203ENST00000558040 PGLSO95336 258 aa17■□□□□ 0.31
SNX1-203ENST00000558040 PIGNO95427 931 aa17■□□□□ 0.31
SNX1-203ENST00000558040 EGFP01133 1207 aa17■□□□□ 0.31
SNX1-203ENST00000558040 EPHX1P07099 455 aa17■□□□□ 0.31
SNX1-203ENST00000558040 ATXN1LP0C7T5 689 aaKnown RBP17■□□□□ 0.31
SNX1-203ENST00000558040 TSHRP16473 764 aa17■□□□□ 0.31
SNX1-203ENST00000558040 PRKCHP24723 683 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms