RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 ATP6AP2A0A1C7CYW4 349 aa17.87■□□□□ 0.45
XRCC3-218ENST00000557439 A0A1W2PQH9 124 aa17.87■□□□□ 0.45
XRCC3-218ENST00000557439 ATP6AP2O75787 350 aa17.87■□□□□ 0.45
XRCC3-218ENST00000557439 ANXA9O76027 345 aa17.87■□□□□ 0.45
XRCC3-218ENST00000557439 SULT2A1Q06520 285 aa17.87■□□□□ 0.45
XRCC3-218ENST00000557439 PTPRCAPQ14761 206 aa17.87■□□□□ 0.45
XRCC3-218ENST00000557439 OGFRL1Q5TC84 451 aaPredicted RBP17.87■□□□□ 0.45
XRCC3-218ENST00000557439 LAYNQ6UX15 382 aa17.87■□□□□ 0.45
XRCC3-218ENST00000557439 C2CD4AQ8NCU7 369 aaPredicted RBP17.87■□□□□ 0.45
XRCC3-218ENST00000557439 TRAPPC9Q96Q05 1148 aa17.87■□□□□ 0.45
XRCC3-218ENST00000557439 E9PAM4 449 aa17.87■□□□□ 0.45
XRCC3-218ENST00000557439 CASQ2O14958 399 aaPredicted RBP17.87■□□□□ 0.45
XRCC3-218ENST00000557439 CELF2O95319 508 aaKnown RBP17.87■□□□□ 0.45
XRCC3-218ENST00000557439 SLC12A2P55011 1212 aa17.87■□□□□ 0.45
XRCC3-218ENST00000557439 EIF4EBP2Q13542 120 aaPredicted RBP17.87■□□□□ 0.45
XRCC3-218ENST00000557439 CLEC6AQ6EIG7 209 aa17.87■□□□□ 0.45
XRCC3-218ENST00000557439 OVOS1Q6IE37 1185 aa17.87■□□□□ 0.45
XRCC3-218ENST00000557439 RANBP10Q6VN20 620 aa17.87■□□□□ 0.45
XRCC3-218ENST00000557439 PIM3Q86V86 326 aa17.87■□□□□ 0.45
XRCC3-218ENST00000557439 SATL1Q86VE3 508 aa17.87■□□□□ 0.45
XRCC3-218ENST00000557439 PKP2Q99959 881 aa17.87■□□□□ 0.45
XRCC3-218ENST00000557439 NOL6Q9H6R4 1146 aaKnown RBP17.87■□□□□ 0.45
XRCC3-218ENST00000557439 NSMCE4AQ9NXX6 385 aa17.87■□□□□ 0.45
XRCC3-218ENST00000557439 ADA2Q9NZK5 511 aa17.87■□□□□ 0.45
XRCC3-218ENST00000557439 IPO11Q9UI26 975 aaKnown RBP17.87■□□□□ 0.45
XRCC3-218ENST00000557439 GLTPD2A6NH11 291 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 B4GALT3O60512 393 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 CCDC166P0CW27 439 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 HAPLN1P10915 354 aaPredicted RBP17.86■□□□□ 0.45
XRCC3-218ENST00000557439 GSTT1P30711 240 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 HOXC8P31273 242 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 HADHAP40939 763 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 CD86P42081 329 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 KCNC1P48547 511 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 RALGDSQ12967 914 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 LIN52Q52LA3 116 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 SPATA24Q86W54 205 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 ZNF354CQ86Y25 554 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 CPSF7Q8N684 471 aaKnown RBP17.86■□□□□ 0.45
XRCC3-218ENST00000557439 TRPV1Q8NER1 839 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 OR9I1Q8NGQ6 314 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 EXT2Q93063 718 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 PABPC5Q96DU9 382 aaKnown RBP17.86■□□□□ 0.45
XRCC3-218ENST00000557439 PKMYT1Q99640 499 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 ACBD6Q9BR61 282 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 CCDC167Q9P0B6 97 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 PADI3Q9ULW8 664 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 TRPM7Q96QT4 1865 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 C15orf38-AP3S2A0A0A6YYH1 394 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 CNTN5O94779 1100 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 CCR1P32246 355 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 ARSDP51689 593 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 GEMP55040 296 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 DSC2Q02487 901 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 SLC10A7Q0GE19 358 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 UGP2Q16851 508 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 MANEALQ5VSG8 457 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 TAF2Q6P1X5 1199 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 PAOXQ6QHF9 649 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 UGT2A3Q6UWM9 527 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 ARPINQ7Z6K5 226 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 GALNT15Q8N3T1 639 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 KATNAL1Q9BW62 490 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 TRIM4Q9C037 500 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 SENP6Q9GZR1 1112 aaPredicted RBP17.86■□□□□ 0.45
XRCC3-218ENST00000557439 A8MT66 165 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 PMLP29590 882 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 ETFBP38117 255 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 PIK3R6Q5UE93 754 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 CWF19L1Q69YN2 538 aaKnown RBP17.86■□□□□ 0.45
XRCC3-218ENST00000557439 CIR1Q86X95 450 aaPredicted RBP17.86■□□□□ 0.45
XRCC3-218ENST00000557439 METTL23Q86XA0 190 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 PGAM4Q8N0Y7 254 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 IRGQQ8WZA9 623 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 SERPINI1Q99574 410 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 VCX3BQ9H321 246 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 FBRSL1Q9HCM7 1045 aaKnown RBP17.86■□□□□ 0.45
XRCC3-218ENST00000557439 TRPC7Q9HCX4 862 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 ABI2Q9NYB9 513 aaPredicted RBP17.86■□□□□ 0.45
XRCC3-218ENST00000557439 NCKIPSDQ9NZQ3 722 aa17.86■□□□□ 0.45
XRCC3-218ENST00000557439 PRPF19Q9UMS4 504 aaKnown RBP17.86■□□□□ 0.45
XRCC3-218ENST00000557439 MIA3Q5JRA6 1907 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 DNAJA2O60884 412 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 TBX18O95935 607 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 SLC4A1P02730 911 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 FAM163BP0C2L3 166 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 YWHAQP27348 245 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 THPOP40225 353 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 DDR2Q16832 855 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 ALFQ53S48 1182 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 C6orf52Q5T4I8 152 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 TMEM207Q6UWW9 146 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 KLHDC8BQ8IXV7 354 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 ST13P4Q8IZP2 240 aaPredicted RBP17.85■□□□□ 0.45
XRCC3-218ENST00000557439 SLC45A3Q96JT2 553 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 CNBD2Q96M20 576 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 LRGUKQ96M69 825 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 MRPL57Q9BQC6 102 aaKnown RBP17.85■□□□□ 0.45
XRCC3-218ENST00000557439 SLC39A3Q9BRY0 314 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 SPATA16Q9BXB7 569 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms