RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 FOXP3Q9BZS1 431 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 EPB41L5Q9HCM4 733 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 OR12D3Q9UGF7 316 aa14.28□□□□□ -0.12
SLIRP-210ENST00000557431 ASH1LQ9NR48 2969 aaKnown RBP14.27□□□□□ -0.12
SLIRP-210ENST00000557431 TENM4Q6N022 2769 aa14.27□□□□□ -0.12
SLIRP-210ENST00000557431 AREL1O15033 823 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 TM7SF2O76062 418 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 TMCC1O94876 653 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 LRIG2O94898 1065 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 PIGNO95427 931 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 PRKCGP05129 697 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 ANXA6P08133 673 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 SCNN1AP37088 669 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 EIF4A3P38919 411 aaKnown RBP14.27□□□□□ -0.13
SLIRP-210ENST00000557431 SNRPD1P62314 119 aaKnown RBP14.27□□□□□ -0.13
SLIRP-210ENST00000557431 SPIDRQ14159 915 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 TGIF1Q15583 401 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 MYLK3Q32MK0 819 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 CCDC14Q49A88 953 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 KLHDC7AQ5VTJ3 777 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 TTC7BQ86TV6 843 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 HID1Q8IV36 788 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 DENND6BQ8NEG7 585 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 PCDH19Q8TAB3 1148 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 SLC30A5Q8TAD4 765 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 EPS8L1Q8TE68 723 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 CCDC74AQ96AQ1 378 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 TUBGCP2Q9BSJ2 902 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 DPH1Q9BZG8 443 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 TRIM4Q9C037 500 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 NOL6Q9H6R4 1146 aaKnown RBP14.27□□□□□ -0.13
SLIRP-210ENST00000557431 TMEM248Q9NWD8 314 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 PPARGC1AQ9UBK2 798 aaKnown RBP14.27□□□□□ -0.13
SLIRP-210ENST00000557431 PADI4Q9UM07 663 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 PIEZO2Q9H5I5 2752 aa14.27□□□□□ -0.13
SLIRP-210ENST00000557431 K7ENP7 123 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 TPP1O14773 563 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 BUB1O43683 1085 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 GFPT2O94808 682 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 GSRP00390 522 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 TIMP2P16035 220 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 RHOQP17081 205 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 ADRA1BP35368 520 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 BPIFB4P59827 614 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 CCL7P80098 99 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 NFKB2Q00653 900 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 POLD3Q15054 466 aaPredicted RBP14.26□□□□□ -0.13
SLIRP-210ENST00000557431 DPCR1Q3MIW9 517 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 INO80CQ6PI98 192 aaPredicted RBP14.26□□□□□ -0.13
SLIRP-210ENST00000557431 IGF2-ASQ6U949 168 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 GDPD4Q6W3E5 623 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 CCDC81Q6ZN84 652 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 JAMLQ86YT9 394 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 SDR16C5Q8N3Y7 309 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 WDR36Q8NI36 951 aaKnown RBP14.26□□□□□ -0.13
SLIRP-210ENST00000557431 CXorf40AQ8TE69 158 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 BTN2A2Q8WVV5 523 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 RAB7BQ96AH8 199 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 ISG20Q96AZ6 181 aaKnown RBP14.26□□□□□ -0.13
SLIRP-210ENST00000557431 TBC1D31Q96DN5 1066 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 NAA15Q9BXJ9 866 aaKnown RBP14.26□□□□□ -0.13
SLIRP-210ENST00000557431 SLC13A1Q9BZW2 595 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 SAMSN1Q9NSI8 373 aaKnown RBP14.26□□□□□ -0.13
SLIRP-210ENST00000557431 SSUH2Q9Y2M2 353 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 PCDHGA8Q9Y5G5 932 aa14.26□□□□□ -0.13
SLIRP-210ENST00000557431 CCDC187A0A096LP49 1063 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 A0A1W2PQM1 296 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 B8ZZF3 427 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 LMO7DNF2Z398 122 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 F8VZ95 297 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 EFSO43281 561 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 SLC28A2O43868 658 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 RAMP2O60895 175 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 POP4O95707 220 aaKnown RBP14.25□□□□□ -0.13
SLIRP-210ENST00000557431 C6P13671 934 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 UCHL3P15374 230 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 CHRNB2P17787 502 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 MAPKAPK2P49137 400 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 HDAC4P56524 1084 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 FMO1Q01740 532 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 PPARDQ03181 441 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 PTK2BQ14289 1009 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 ALG11Q2TAA5 492 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 ENPP7Q6UWV6 458 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 MACC1Q6ZN28 852 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 CPEB1Q9BZB8 566 aaKnown RBP14.25□□□□□ -0.13
SLIRP-210ENST00000557431 TAB2Q9NYJ8 693 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.25□□□□□ -0.13
SLIRP-210ENST00000557431 LHX3Q9UBR4 397 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 NOCTQ9UK39 431 aaKnown RBP14.25□□□□□ -0.13
SLIRP-210ENST00000557431 DOLKQ9UPQ8 538 aa14.25□□□□□ -0.13
SLIRP-210ENST00000557431 C2CD4BA6NLJ0 364 aa14.24□□□□□ -0.13
SLIRP-210ENST00000557431 NTN3O00634 580 aaPredicted RBP14.24□□□□□ -0.13
SLIRP-210ENST00000557431 KDELR3O43731 214 aa14.24□□□□□ -0.13
SLIRP-210ENST00000557431 TCEA3O75764 348 aa14.24□□□□□ -0.13
SLIRP-210ENST00000557431 LSM8O95777 96 aaKnown RBP14.24□□□□□ -0.13
SLIRP-210ENST00000557431 PCCBP05166 539 aa14.24□□□□□ -0.13
SLIRP-210ENST00000557431 RPLP0P05388 317 aaKnown RBP14.24□□□□□ -0.13
SLIRP-210ENST00000557431 PLEKP08567 350 aaPredicted RBP14.24□□□□□ -0.13
SLIRP-210ENST00000557431 ITIH1P19827 911 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms