RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 A0A1W2PQU0 124 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 C10orf142B7Z368 130 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 FPGTO14772 594 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 PPP1R12AO14974 1030 aaPredicted RBP7.94□□□□□ -1.14
PSEN1-222ENST00000557356 MATN3O15232 486 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 SLC31A1O15431 190 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 BUB1BO60566 1050 aaPredicted RBP7.94□□□□□ -1.14
PSEN1-222ENST00000557356 SOCS5O75159 536 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 TCF4P15884 667 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 COMTP21964 271 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 GARSP41250 739 aaKnown RBP7.94□□□□□ -1.14
PSEN1-222ENST00000557356 MMP13P45452 471 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 VAV2P52735 878 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 TAS2R38P59533 333 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 TAS2R40P59535 323 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 COPS2P61201 443 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 GRIK2Q13002 908 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 UGP2Q16851 508 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 ZNF284Q2VY69 593 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 HLA-BQ31612 363 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 ATP13A4Q4VNC1 1196 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 ATXN7L2Q5T6C5 722 aaPredicted RBP7.94□□□□□ -1.14
PSEN1-222ENST00000557356 TXNRD3NBQ6F5E7 133 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 NPWQ8N729 165 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 TSEN2Q8NCE0 465 aaKnown RBP7.94□□□□□ -1.14
PSEN1-222ENST00000557356 CCNYQ8ND76 341 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 DENND6BQ8NEG7 585 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 PCDH19Q8TAB3 1148 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 CXorf40AQ8TE69 158 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 SPOCK2Q92563 424 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 ANP32BQ92688 251 aaKnown RBP7.94□□□□□ -1.14
PSEN1-222ENST00000557356 IFT43Q96FT9 208 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 RBM41Q96IZ5 413 aaKnown RBP7.94□□□□□ -1.14
PSEN1-222ENST00000557356 NUDCD1Q96RS6 583 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 CDC6Q99741 560 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 C1QTNF2Q9BXJ5 285 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 TSGA10Q9BZW7 698 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 POLR1EQ9GZS1 481 aaKnown RBP7.94□□□□□ -1.14
PSEN1-222ENST00000557356 SCUBE2Q9NQ36 999 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 LHX3Q9UBR4 397 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 DNPEPQ9ULA0 475 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 EFR3BQ9Y2G0 817 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 ACTL7AQ9Y615 435 aa7.94□□□□□ -1.14
PSEN1-222ENST00000557356 RIF1Q5UIP0 2472 aaKnown RBP7.94□□□□□ -1.14
PSEN1-222ENST00000557356 MUC22E2RYF6 1773 aaPredicted RBP7.94□□□□□ -1.14
PSEN1-222ENST00000557356 RALGAPA1Q6GYQ0 2036 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 A0A1W2PR77 199 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 TSPAN11A1L157 253 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 CCDC66A2RUB6 948 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 DCDC2BA2VCK2 349 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 SOWAHDA6NJG2 315 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 MIF4GDA9UHW6 222 aaKnown RBP7.93□□□□□ -1.14
PSEN1-222ENST00000557356 PLK4O00444 970 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 RIOK3O14730 519 aaKnown RBP7.93□□□□□ -1.14
PSEN1-222ENST00000557356 AREL1O15033 823 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 FLRT2O43155 660 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 PJA2O43164 708 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 KRT86O43790 486 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 PCDHGA12O60330 932 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 TM7SF2O76062 418 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 PAK4O96013 591 aaPredicted RBP7.93□□□□□ -1.14
PSEN1-222ENST00000557356 KRT1P04264 644 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 CD48P09326 243 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 CCNB1P14635 433 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 TIMP2P16035 220 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 MAT2AP31153 395 aaKnown RBP7.93□□□□□ -1.14
PSEN1-222ENST00000557356 RABIFP47224 123 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 CCT8P50990 548 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 METAP1P53582 386 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 YPEL5P62699 121 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 ITKQ08881 620 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 SLC10A7Q0GE19 358 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 MMRN1Q13201 1228 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 PTK2BQ14289 1009 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 ZNF423Q2M1K9 1284 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 KIF19Q2TAC6 998 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 TMEM52BQ4KMG9 183 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 TMEM259Q4ZIN3 620 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 HS1BP3Q53T59 392 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 TFDP3Q5H9I0 405 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 NCBP2-AS2Q69YL0 99 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 SLC9A4Q6AI14 798 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 PARS2Q7L3T8 475 aaKnown RBP7.93□□□□□ -1.14
PSEN1-222ENST00000557356 RFX6Q8HWS3 928 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 KATNAL2Q8IYT4 538 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 RNF10Q8N5U6 811 aaKnown RBP7.93□□□□□ -1.14
PSEN1-222ENST00000557356 TEX26Q8N6G2 289 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 SPC24Q8NBT2 197 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 OR6K2Q8NGY2 324 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 ATL2Q8NHH9 583 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 EXD1Q8NHP7 514 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 TPCN2Q8NHX9 752 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 RAPGEF5Q92565 580 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 RNF25Q96BH1 459 aaPredicted RBP7.93□□□□□ -1.14
PSEN1-222ENST00000557356 HDAC11Q96DB2 347 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 ELF4Q99607 663 aaPredicted RBP7.93□□□□□ -1.14
PSEN1-222ENST00000557356 MGME1Q9BQP7 344 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 ORAI3Q9BRQ5 295 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 TM7SF3Q9NS93 570 aa7.93□□□□□ -1.14
PSEN1-222ENST00000557356 RXFP3Q9NSD7 469 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms