RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 RPLP0P05388 317 aaKnown RBP12.47□□□□□ -0.41
SNX6-209ENST00000557265 FAM87AP0C7U9 286 aa12.47□□□□□ -0.41
SNX6-209ENST00000557265 CLCN1P35523 988 aa12.47□□□□□ -0.41
SNX6-209ENST00000557265 MORC3Q14149 939 aa12.47□□□□□ -0.41
SNX6-209ENST00000557265 POLD3Q15054 466 aaPredicted RBP12.47□□□□□ -0.41
SNX6-209ENST00000557265 TCEA2Q15560 299 aa12.47□□□□□ -0.41
SNX6-209ENST00000557265 MYLK3Q32MK0 819 aa12.47□□□□□ -0.41
SNX6-209ENST00000557265 FAM102AQ5T9C2 384 aaPredicted RBP12.47□□□□□ -0.41
SNX6-209ENST00000557265 LEKR1Q6ZMV7 388 aa12.47□□□□□ -0.41
SNX6-209ENST00000557265 ATG14Q6ZNE5 492 aa12.47□□□□□ -0.41
SNX6-209ENST00000557265 FAM131BQ86XD5 332 aa12.47□□□□□ -0.41
SNX6-209ENST00000557265 ELOA2Q8IYF1 753 aaPredicted RBP12.47□□□□□ -0.41
SNX6-209ENST00000557265 SDR16C5Q8N3Y7 309 aa12.47□□□□□ -0.41
SNX6-209ENST00000557265 FSTL5Q8N475 847 aaPredicted RBP12.47□□□□□ -0.41
SNX6-209ENST00000557265 OR2AP1Q8NGE2 309 aa12.47□□□□□ -0.41
SNX6-209ENST00000557265 PCDH19Q8TAB3 1148 aa12.47□□□□□ -0.41
SNX6-209ENST00000557265 TSACCQ96A04 125 aaPredicted RBP12.47□□□□□ -0.41
SNX6-209ENST00000557265 VOPP1Q96AW1 172 aa12.47□□□□□ -0.41
SNX6-209ENST00000557265 CPEB1Q9BZB8 566 aaKnown RBP12.47□□□□□ -0.41
SNX6-209ENST00000557265 TMEM51Q9NW97 253 aa12.47□□□□□ -0.41
SNX6-209ENST00000557265 PISDQ9UG56 409 aa12.47□□□□□ -0.41
SNX6-209ENST00000557265 ACSL6Q9UKU0 697 aa12.47□□□□□ -0.41
SNX6-209ENST00000557265 GPR34Q9UPC5 381 aa12.47□□□□□ -0.41
SNX6-209ENST00000557265 TRPM6Q9BX84 2022 aa12.47□□□□□ -0.41
SNX6-209ENST00000557265 CXorf51AA0A1B0GTR3 108 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 AGRPO00253 132 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 FOXN3O00409 490 aaPredicted RBP12.46□□□□□ -0.41
SNX6-209ENST00000557265 TOR1BO14657 336 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 NVLO15381 856 aaKnown RBP12.46□□□□□ -0.41
SNX6-209ENST00000557265 SUV39H1O43463 412 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 FGFR1OPO95684 399 aaKnown RBP12.46□□□□□ -0.41
SNX6-209ENST00000557265 GSRP00390 522 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 ALPIP09923 528 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 JMJD7P0C870 316 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 PNMA6AP0CW24 399 aaPredicted RBP12.46□□□□□ -0.41
SNX6-209ENST00000557265 CTSEP14091 401 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 ITGB6P18564 788 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 ITIH2P19823 946 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 PON1P27169 355 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 FLT3P36888 993 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 BLKP51451 505 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 HK3P52790 923 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 SNRPD1P62314 119 aaKnown RBP12.46□□□□□ -0.41
SNX6-209ENST00000557265 SRSF1Q07955 248 aaKnown RBP eCLIP12.46□□□□□ -0.412e-6■□□□□ 11.1
SNX6-209ENST00000557265 ELOCQ15369 112 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 EXOC3L4Q17RC7 722 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 KLHL40Q2TBA0 621 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 COLEC12Q5KU26 742 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 ATXN7L2Q5T6C5 722 aaPredicted RBP12.46□□□□□ -0.41
SNX6-209ENST00000557265 LVRNQ6Q4G3 990 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 RD3Q7Z3Z2 195 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 HID1Q8IV36 788 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 TP53I13Q8NBR0 393 aaPredicted RBP12.46□□□□□ -0.41
SNX6-209ENST00000557265 TMEM35BQ8NCS4 154 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 CXorf40AQ8TE69 158 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 ARHGEF2Q92974 986 aaKnown RBP12.46□□□□□ -0.41
SNX6-209ENST00000557265 C18orf8Q96DM3 657 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 TMEM74Q96NL1 305 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 EPAS1Q99814 870 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 C1QTNF7Q9BXJ2 289 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 OSBPL1AQ9BXW6 950 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 EDEM3Q9BZQ6 932 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 PDCL3Q9H2J4 239 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 NDFIP2Q9NV92 336 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 PPARGC1AQ9UBK2 798 aaKnown RBP12.46□□□□□ -0.41
SNX6-209ENST00000557265 DNAJC12Q9UKB3 198 aa12.46□□□□□ -0.41
SNX6-209ENST00000557265 AJAP1Q9UKB5 411 aaPredicted RBP12.46□□□□□ -0.41
SNX6-209ENST00000557265 RP1P56715 2156 aa12.46□□□□□ -0.42
SNX6-209ENST00000557265 UBR5O95071 2799 aaPredicted RBP12.45□□□□□ -0.42
SNX6-209ENST00000557265 COL27A1Q8IZC6 1860 aaPredicted RBP12.45□□□□□ -0.42
SNX6-209ENST00000557265 LIPCP11150 499 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 SFTPCP11686 197 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 CCKBRP32239 447 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 SCNN1AP37088 669 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 ETFBP38117 255 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 GABRB2P47870 512 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 GEMIN4P57678 1058 aaKnown RBP12.45□□□□□ -0.42
SNX6-209ENST00000557265 IRF4Q15306 451 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 ALG11Q2TAA5 492 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 C2CD6Q53TS8 623 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 MANEAQ5SRI9 462 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 TRNP1Q6NT89 227 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 RWDD4Q6NW29 188 aaKnown RBP12.45□□□□□ -0.42
SNX6-209ENST00000557265 GDPD4Q6W3E5 623 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 VASH2Q86V25 355 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 XYLT1Q86Y38 959 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 Q8N9G6 341 aaPredicted RBP12.45□□□□□ -0.42
SNX6-209ENST00000557265 CFAP57Q96MR6 1250 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 WRAP53Q9BUR4 548 aaKnown RBP12.45□□□□□ -0.42
SNX6-209ENST00000557265 LRRN3Q9H3W5 708 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 SIX2Q9NPC8 291 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 DNAI1Q9UI46 699 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 HPCAL4Q9UM19 191 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 LOXL2Q9Y4K0 774 aa12.45□□□□□ -0.42
SNX6-209ENST00000557265 PRAMEF33A0A0G2JMD5 474 aa12.44□□□□□ -0.42
SNX6-209ENST00000557265 TMEM110-MUSTN1A8MSY1 372 aa12.44□□□□□ -0.42
SNX6-209ENST00000557265 GOLGA8SH3BPF8 625 aa12.44□□□□□ -0.42
SNX6-209ENST00000557265 PRAMEF10O60809 474 aa12.44□□□□□ -0.42
SNX6-209ENST00000557265 RASGRP1O95267 797 aa12.44□□□□□ -0.42
SNX6-209ENST00000557265 TIMP2P16035 220 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms