RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 DIS3LQ8TF46 1054 aaKnown RBP11.5□□□□□ -0.57
SRP54-213ENST00000556994 SNRNP27Q8WVK2 155 aaKnown RBP11.5□□□□□ -0.57
SRP54-213ENST00000556994 HDAC11Q96DB2 347 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 ZNF419Q96HQ0 510 aaPredicted RBP11.5□□□□□ -0.57
SRP54-213ENST00000556994 LRCH3Q96II8 777 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 OSBPL11Q9BXB4 747 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 DNAI2Q9GZS0 605 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 IL1RL2Q9HB29 575 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 FBRSL1Q9HCM7 1045 aaKnown RBP11.5□□□□□ -0.57
SRP54-213ENST00000556994 SUCOQ9UBS9 1254 aaKnown RBP11.5□□□□□ -0.57
SRP54-213ENST00000556994 TRHDEQ9UKU6 1024 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 CNOT11Q9UKZ1 510 aaKnown RBP11.5□□□□□ -0.57
SRP54-213ENST00000556994 MYRFQ9Y2G1 1151 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 CEP350Q5VT06 3117 aa11.5□□□□□ -0.57
SRP54-213ENST00000556994 SAC3D1A6NKF1 404 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 H3BNH8 94 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 SOCS2O14508 198 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 TRIM24O15164 1050 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 NCAM2O15394 837 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 HTRA2O43464 458 aaPredicted RBP11.49□□□□□ -0.57
SRP54-213ENST00000556994 GPC4O75487 556 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 LILRA4P59901 499 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 GALNT2Q10471 571 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 STX5Q13190 355 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 PRPSAP1Q14558 356 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 ZNF789Q5FWF6 425 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 PCID2Q5JVF3 399 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 ZNF470Q6ECI4 717 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 CLEC6AQ6EIG7 209 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 RWDD4Q6NW29 188 aaKnown RBP11.49□□□□□ -0.57
SRP54-213ENST00000556994 ZBTB49Q6ZSB9 765 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 FAM47BQ8NA70 645 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 CANT1Q8WVQ1 401 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 HAUS8Q9BT25 410 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 FICDQ9BVA6 458 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 TKTL2Q9H0I9 626 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 SIK2Q9H0K1 926 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 ADAMTS10Q9H324 1103 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 WDCPQ9H6R7 721 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 SPON1Q9HCB6 807 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 TMEM30AQ9NV96 361 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 GDAP2Q9NXN4 497 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 UTP6Q9NYH9 597 aaKnown RBP11.49□□□□□ -0.57
SRP54-213ENST00000556994 CNOT6Q9ULM6 557 aaKnown RBP11.49□□□□□ -0.57
SRP54-213ENST00000556994 PADI4Q9UM07 663 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 TIMM13Q9Y5L4 95 aaPredicted RBP11.49□□□□□ -0.57
SRP54-213ENST00000556994 A0A0G2JLL6 359 aaPredicted RBP11.49□□□□□ -0.57
SRP54-213ENST00000556994 AKAP10O43572 662 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 NPHS1O60500 1241 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 FOXD2O60548 495 aaPredicted RBP11.49□□□□□ -0.57
SRP54-213ENST00000556994 SEC24DO94855 1032 aaPredicted RBP11.49□□□□□ -0.57
SRP54-213ENST00000556994 ZBTB7AO95365 584 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 GNAO1P09471 354 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 UGT1A6P19224 532 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 ETFBP38117 255 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 GRIA3P42263 894 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 CHRNA4P43681 627 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 ARCN1P48444 511 aaKnown RBP11.49□□□□□ -0.57
SRP54-213ENST00000556994 NOMO2Q5JPE7 1267 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 C6orf10Q5SRN2 563 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 NOTUMQ6P988 496 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 PRRT2Q7Z6L0 340 aaPredicted RBP11.49□□□□□ -0.57
SRP54-213ENST00000556994 PPTC7Q8NI37 304 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 RMND5BQ96G75 393 aaPredicted RBP11.49□□□□□ -0.57
SRP54-213ENST00000556994 TBL1YQ9BQ87 522 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 COLEC11Q9BWP8 271 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 SPAG4Q9NPE6 437 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 DUS2Q9NX74 493 aaKnown RBP11.49□□□□□ -0.57
SRP54-213ENST00000556994 NSMCE4AQ9NXX6 385 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 THEGQ9P2T0 379 aa11.49□□□□□ -0.57
SRP54-213ENST00000556994 PIN4Q9Y237 131 aaKnown RBP11.49□□□□□ -0.57
SRP54-213ENST00000556994 FAM149AA5PLN7 773 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 ADM5C9JUS6 153 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 C9JVG2 144 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 MRASO14807 208 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 PMPCBO75439 489 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 CD4P01730 458 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 COL6A2P12110 1019 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 CDK9P50750 372 aaKnown RBP11.48□□□□□ -0.57
SRP54-213ENST00000556994 SLC7A2P52569 658 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 SLC12A2P55011 1212 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 DAOAP59103 153 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 CCNA1P78396 465 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 PLOD1Q02809 727 aaPredicted RBP11.48□□□□□ -0.57
SRP54-213ENST00000556994 SEPT6Q14141 434 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 ADRM1Q16186 407 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 DUS1LQ6P1R4 473 aaKnown RBP11.48□□□□□ -0.57
SRP54-213ENST00000556994 POTEHQ6S545 545 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 CHSY3Q70JA7 882 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 PIWIL4Q7Z3Z4 852 aaKnown RBP11.48□□□□□ -0.57
SRP54-213ENST00000556994 CUZD1Q86UP6 607 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 ERI1Q8IV48 349 aaKnown RBP11.48□□□□□ -0.57
SRP54-213ENST00000556994 RNF34Q969K3 372 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 ZNF560Q96MR9 790 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 MRPL57Q9BQC6 102 aaKnown RBP11.48□□□□□ -0.57
SRP54-213ENST00000556994 RHOBTB2Q9BYZ6 727 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 GPRC5DQ9NZD1 345 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 EBF1Q9UH73 591 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 AURKCQ9UQB9 309 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 TSC2P49815 1807 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms