RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 CXCL16Q9H2A7 254 aa4.62□□□□□ -1.67
SRP54-212ENST00000556992 DPH5Q9H2P9 285 aa4.62□□□□□ -1.67
SRP54-212ENST00000556992 RSAD1Q9HA92 442 aa4.62□□□□□ -1.67
SRP54-212ENST00000556992 ERVK-5Q9HDB9 667 aa4.62□□□□□ -1.67
SRP54-212ENST00000556992 TMEM51Q9NW97 253 aa4.62□□□□□ -1.67
SRP54-212ENST00000556992 HMGXB4Q9UGU5 601 aa4.62□□□□□ -1.67
SRP54-212ENST00000556992 FAM153AQ9UHL3 310 aa4.62□□□□□ -1.67
SRP54-212ENST00000556992 CYTH4Q9UIA0 394 aa4.62□□□□□ -1.67
SRP54-212ENST00000556992 ANAPC5Q9UJX4 755 aa4.62□□□□□ -1.67
SRP54-212ENST00000556992 ZNF148Q9UQR1 794 aa4.62□□□□□ -1.67
SRP54-212ENST00000556992 SNX24Q9Y343 169 aa4.62□□□□□ -1.67
SRP54-212ENST00000556992 A0A0G2JMZ2 1700 aa4.62□□□□□ -1.67
SRP54-212ENST00000556992 GRIN2DO15399 1336 aa4.62□□□□□ -1.67
SRP54-212ENST00000556992 LOC285556D6RIA3 1793 aa4.62□□□□□ -1.67
SRP54-212ENST00000556992 hCG_1818297A0A087WSY0 165 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 ZSCAN5CA6NGD5 496 aaPredicted RBP4.61□□□□□ -1.67
SRP54-212ENST00000556992 C2CD4BA6NLJ0 364 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 ZNF487B1APH4 448 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 E5RJQ4 531 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 PI4K2BG5E9Z4 385 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 AGPSO00116 658 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 PTGESO14684 152 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 PPEF2O14830 753 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 XPO1O14980 1071 aaKnown RBP4.61□□□□□ -1.67
SRP54-212ENST00000556992 INPPL1O15357 1258 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 TRAPPC3O43617 180 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 LIASO43766 372 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 LRCH4O75427 683 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 SYF2O95926 243 aaKnown RBP4.61□□□□□ -1.67
SRP54-212ENST00000556992 MYZAPP0CAP1 466 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 RARGP13631 454 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 ZFXP17010 805 aaPredicted RBP4.61□□□□□ -1.67
SRP54-212ENST00000556992 LMO2P25791 158 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 APEX1P27695 318 aaKnown RBP4.61□□□□□ -1.67
SRP54-212ENST00000556992 PCSK1P29120 753 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 ECHS1P30084 290 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 MIPP30301 263 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 CD52P31358 61 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 ADRA1BP35368 520 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 HSD17B3P37058 310 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 CDKN2BP42772 138 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 PTPN9P43378 593 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 KCNJ1P48048 391 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 RGS7P49802 495 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 PTTG1IPP53801 180 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 PMS2P54278 862 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 BCAT1P54687 386 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 YWHAZP63104 245 aaKnown RBP4.61□□□□□ -1.67
SRP54-212ENST00000556992 SUMO1P63165 101 aaKnown RBP4.61□□□□□ -1.67
SRP54-212ENST00000556992 OGDHQ02218 1023 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 IFFO1Q0D2I5 559 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 BFSP2Q13515 415 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 SNX1Q13596 522 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 PTK6Q13882 451 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 LPIN1Q14693 890 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 MAPRE1Q15691 268 aaKnown RBP4.61□□□□□ -1.67
SRP54-212ENST00000556992 TAZQ16635 292 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 UPP1Q16831 310 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 TRIM71Q2Q1W2 868 aaKnown RBP4.61□□□□□ -1.67
SRP54-212ENST00000556992 CCDC14Q49A88 953 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 ATP13A4Q4VNC1 1196 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 CATSPEREQ5SY80 951 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 EMC10Q5UCC4 262 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 WSCD1Q658N2 575 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 FAM111BQ6SJ93 734 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 MFSD7Q6UXD7 560 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 BBS12Q6ZW61 710 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 SLC24A5Q71RS6 500 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 TRMT10CQ7L0Y3 403 aaKnown RBP4.61□□□□□ -1.67
SRP54-212ENST00000556992 SLC26A9Q7LBE3 791 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 PCGF5Q86SE9 256 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 TTC30AQ86WT1 665 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 VSIG1Q86XK7 387 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 PSTKQ8IV42 348 aaKnown RBP4.61□□□□□ -1.67
SRP54-212ENST00000556992 GSPT2Q8IYD1 628 aaKnown RBP4.61□□□□□ -1.67
SRP54-212ENST00000556992 THEM5Q8N1Q8 247 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 ARFGAP1Q8N6T3 406 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 SLC43A3Q8NBI5 491 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 B3GALNT2Q8NCR0 500 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 GSTCDQ8NEC7 633 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 JOSD2Q8TAC2 188 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 MYCBPAPQ8TBZ2 947 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 CD99L2Q8TCZ2 262 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 SLC2A14Q8TDB8 520 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 SLC25A43Q8WUT9 341 aaPredicted RBP4.61□□□□□ -1.67
SRP54-212ENST00000556992 TEKT4Q8WW24 435 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 RAPGEF5Q92565 580 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 CENPIQ92674 756 aaPredicted RBP4.61□□□□□ -1.67
SRP54-212ENST00000556992 SNF8Q96H20 258 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 SENP8Q96LD8 212 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 FMO2Q99518 471 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 SH3GL2Q99962 352 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 ADAM2Q99965 735 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 ACBD6Q9BR61 282 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 CCDC77Q9BR77 488 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 FTHL17Q9BXU8 183 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 TRIM31Q9BZY9 425 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 TRPV6Q9H1D0 765 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 PABPC3Q9H361 631 aaKnown RBP4.61□□□□□ -1.67
SRP54-212ENST00000556992 PLEKHA4Q9H4M7 779 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms