RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 IQCB1Q15051 598 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 NFKBIBQ15653 356 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 MYLK3Q32MK0 819 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 CCDC157Q569K6 752 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 ZNF805Q5CZA5 627 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 PRAMEF14Q5SWL7 426 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 PIP5KL1Q5T9C9 394 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 PLEKHA7Q6IQ23 1121 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 KIAA1161Q6NSJ0 714 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 ZNF571Q7Z3V5 609 aaPredicted RBP7.44□□□□□ -1.22
SCFD1-222ENST00000556768 LUZP1Q86V48 1076 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 DCP2Q8IU60 420 aaKnown RBP7.44□□□□□ -1.22
SCFD1-222ENST00000556768 PSTKQ8IV42 348 aaKnown RBP7.44□□□□□ -1.22
SCFD1-222ENST00000556768 PNPLA1Q8N8W4 532 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 FNIP1Q8TF40 1166 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 ADAMTS14Q8WXS8 1223 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 SYN2Q92777 582 aaPredicted RBP7.44□□□□□ -1.22
SCFD1-222ENST00000556768 ZNF653Q96CK0 615 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 CRELD1Q96HD1 420 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 GDAP1L1Q96MZ0 367 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 ORAI3Q9BRQ5 295 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 C1QTNF7Q9BXJ2 289 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 SLC17A9Q9BYT1 436 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 TTYH3Q9C0H2 523 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 DHX35Q9H5Z1 703 aaKnown RBP7.44□□□□□ -1.22
SCFD1-222ENST00000556768 EBF2Q9HAK2 575 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 CBX8Q9HC52 389 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 NDFIP2Q9NV92 336 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 ZNF212Q9UDV6 495 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 CNOT8Q9UFF9 292 aaKnown RBP7.44□□□□□ -1.22
SCFD1-222ENST00000556768 PCSK1NQ9UHG2 260 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 IPO11Q9UI26 975 aaKnown RBP7.44□□□□□ -1.22
SCFD1-222ENST00000556768 AP4E1Q9UPM8 1137 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 AK5Q9Y6K8 562 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 CACNA1EQ15878 2313 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 ZFHX4Q86UP3 3567 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 A0A1W2PQJ5 194 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 NEMP2A6NFY4 417 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 TMEM191CA6NGB0 347 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 ARHGAP42A6NI28 874 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 C16orf96A6NNT2 1141 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 RASA4BC9J798 803 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 RASA4O43374 803 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 AP1G1O43747 822 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 ZNF821O75541 412 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-222ENST00000556768 LDOC1O95751 146 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-222ENST00000556768 PAK4O96013 591 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-222ENST00000556768 GSRP00390 522 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 SERPING1P05155 500 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 THEGLP0DJG4 465 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 SKILP12757 684 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 PRLRP16471 622 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 ARL4AP40617 200 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 RXRGP48443 463 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 RHOAP61586 193 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 ZBED6P86452 979 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 RAB6CQ53S08 254 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 BOLA3Q53S33 107 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 PPP6R3Q5H9R7 873 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-222ENST00000556768 KCNT1Q5JUK3 1230 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 GDPD4Q6W3E5 623 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 RAB44Q7Z6P3 723 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-222ENST00000556768 UMODL1-AS1Q8N2C9 162 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 PYROXD2Q8N2H3 581 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 LZTR1Q8N653 840 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 CPLX3Q8WVH0 158 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 CALN1Q9BXU9 219 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 RAB6CQ9H0N0 254 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 ZNHIT6Q9NWK9 470 aaKnown RBP7.43□□□□□ -1.22
SCFD1-222ENST00000556768 TAS2R14Q9NYV8 317 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 MYO1AQ9UBC5 1043 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 UBA2Q9UBT2 640 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-222ENST00000556768 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.43□□□□□ -1.223e-6■□□□□ 10.3
SCFD1-222ENST00000556768 HS3ST3A1Q9Y663 406 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 WASF2Q9Y6W5 498 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 KNL1Q8NG31 2342 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 EML5Q05BV3 1969 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 A0A1W2PR77 199 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 TCRBV5S1A1TA0A578 114 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 A6NNZ2 444 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 WASH4PA8MWX3 477 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 MYO1FO00160 1098 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 CDK2AP1O14519 115 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 FPGTO14772 594 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 CBFA2T2O43439 604 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 PALMO75781 387 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 TMCC1O94876 653 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 PDGFAP04085 211 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 WNT1P04628 370 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 UGT2B4P06133 528 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 C1SP09871 688 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 ALPPL2P10696 532 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 PCK1P35558 622 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 SUOXP51687 545 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 TAS2R38P59533 333 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 SERINC3Q13530 473 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 PIGHQ14442 188 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-222ENST00000556768 ZNF284Q2VY69 593 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 LEKR1Q6ZMV7 388 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 GATAD2AQ86YP4 633 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms