RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 TMEM204Q9BSN7 226 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 POLR3GLQ9BT43 218 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 C20orf141Q9NUB4 165 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 NDRG3Q9UGV2 375 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 CCDC189A1A4V9 331 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 LACTBL1A8MY62 500 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 TIMM23O14925 209 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 ASAP2O43150 1006 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 ATP2C2O75185 946 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 TACC1O75410 805 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 HEXAP06865 529 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 GALTP07902 379 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 PLA2G2AP14555 144 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 ZNF8P17098 575 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-221ENST00000556534 XBP1P17861 261 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 ITGAXP20702 1163 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 AMTP48728 403 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 PCYT1AP49585 367 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 RPP30P78346 268 aaKnown RBP4.76□□□□□ -1.65
SCFD1-221ENST00000556534 CAMK1Q14012 370 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 ERV3-1Q14264 604 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 ESCO2Q56NI9 601 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 TADA2BQ86TJ2 420 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 TBC1D26Q86UD7 250 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 CERS3Q8IU89 383 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 LURAP1LQ8IV03 231 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 MB21D2Q8IYB1 491 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-221ENST00000556534 C11orf65Q8NCR3 313 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 MPHOSPH8Q99549 860 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 EIF2AK1Q9BQI3 630 aaKnown RBP4.76□□□□□ -1.65
SCFD1-221ENST00000556534 HEMGNQ9BXL5 484 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 HIPK2Q9H2X6 1198 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 UBN1Q9NPG3 1134 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 TMEM51Q9NW97 253 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 PPP1R14DQ9NXH3 145 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 CTNNAL1Q9UBT7 734 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 SLC45A1Q9Y2W3 748 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 A3GALT2U3KPV4 340 aa4.76□□□□□ -1.65
SCFD1-221ENST00000556534 IGKV2D-30A0A075B6S6 120 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 A6NLC8 198 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 KLRF2D3W0D1 207 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 IFNL4K9M1U5 179 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 NPHP1O15259 732 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 ITM2AO43736 263 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 KLK8O60259 260 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 F9P00740 461 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 ABCD3P28288 659 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 FMO4P31512 558 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 UFM1P61960 85 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 ST3GAL1Q11201 340 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 RUNX2Q13950 521 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 TAF11Q15544 211 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 TDRD12Q587J7 1177 aaKnown RBP4.75□□□□□ -1.65
SCFD1-221ENST00000556534 DCAF6Q58WW2 860 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 PRAMEF19Q5SWL8 479 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 LRRC8EQ6NSJ5 796 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 H1FNTQ75WM6 255 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-221ENST00000556534 GPAT4Q86UL3 456 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 CCDC105Q8IYK2 499 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 KIAA2013Q8IYS2 634 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 IQCF1Q8N6M8 205 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 GJC3Q8NFK1 279 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 ARRDC2Q8TBH0 407 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 ELP5Q8TE02 316 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 NEUROG1Q92886 237 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 SNAPC3Q92966 411 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 NUF2Q9BZD4 464 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 BABAM1Q9NWV8 329 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 CARD8Q9Y2G2 431 aa4.75□□□□□ -1.65
SCFD1-221ENST00000556534 TEX13CA0A0J9YWL9 993 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 TYW5A2RUC4 315 aaKnown RBP4.74□□□□□ -1.65
SCFD1-221ENST00000556534 J3KR12 359 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 TNFSF14O43557 240 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 ACAA1P09110 424 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-221ENST00000556534 CBSLP0DN79 551 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 TFPIP10646 304 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 ITGB6P18564 788 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 ITGB8P26012 769 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 POU1F1P28069 291 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 CCKARP32238 428 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 CBSP35520 551 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 KCNJ4P48050 445 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 MXI1P50539 228 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 NR1H2P55055 460 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 ZXDBP98169 803 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 LTBQ06643 244 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 DSC1Q08554 894 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 PTP4A2Q12974 167 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 SLC9B1Q4ZJI4 515 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 ALFQ53S48 1182 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 MEPCEQ7L2J0 689 aaKnown RBP4.74□□□□□ -1.65
SCFD1-221ENST00000556534 PARP16Q8N5Y8 322 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 OR14A16Q8NHC5 309 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 NOC3LQ8WTT2 800 aaKnown RBP4.74□□□□□ -1.65
SCFD1-221ENST00000556534 ZPBPQ9BS86 351 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 NTPCRQ9BSD7 190 aaKnown RBP4.74□□□□□ -1.65
SCFD1-221ENST00000556534 SLC25A18Q9H1K4 315 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 CYSLTR2Q9NS75 346 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 WNT16Q9UBV4 365 aa4.74□□□□□ -1.65
SCFD1-221ENST00000556534 SARDHQ9UL12 918 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms