RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 CAPN10Q9HC96 672 aa17.28■□□□□ 0.36
PSEN1-217ENST00000556533 SCUBE2Q9NQ36 999 aa17.28■□□□□ 0.36
PSEN1-217ENST00000556533 RBM22Q9NW64 420 aaKnown RBP eCLIP17.28■□□□□ 0.36
PSEN1-217ENST00000556533 SAE1Q9UBE0 346 aaPredicted RBP17.28■□□□□ 0.36
PSEN1-217ENST00000556533 AMFRQ9UKV5 643 aa17.28■□□□□ 0.36
PSEN1-217ENST00000556533 CDV3Q9UKY7 258 aaKnown RBP17.28■□□□□ 0.36
PSEN1-217ENST00000556533 ITM2BQ9Y287 266 aa17.28■□□□□ 0.36
PSEN1-217ENST00000556533 PCDHA3Q9Y5H8 950 aa17.28■□□□□ 0.36
PSEN1-217ENST00000556533 FADS3Q9Y5Q0 445 aa17.28■□□□□ 0.36
PSEN1-217ENST00000556533 A0A1B0GVT2 93 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 ARHGAP33O14559 1287 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 MATN3O15232 486 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 FTCDO95954 541 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 SYPP08247 313 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 CCNB1P14635 433 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 PRLRP16471 622 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 SERPINA4P29622 427 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 CTNNA1P35221 906 aaKnown RBP17.27■□□□□ 0.36
PSEN1-217ENST00000556533 HSPA9P38646 679 aaKnown RBP17.27■□□□□ 0.36
PSEN1-217ENST00000556533 ABL2P42684 1182 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 AP1S1P61966 158 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 AP1B1Q10567 949 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 HNRNPDQ14103 355 aaKnown RBP17.27■□□□□ 0.36
PSEN1-217ENST00000556533 PDK1Q15118 436 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 TEAD4Q15561 434 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 UAP1L1Q3KQV9 507 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 TFDP3Q5H9I0 405 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 STPG1Q5TH74 334 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 SEL1L3Q68CR1 1132 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 LAYNQ6UX15 382 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 TRIM69Q86WT6 500 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 HORMAD1Q86X24 394 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 CCDC13Q8IYE1 715 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 OR2I1PQ8NGU4 316 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 C1orf216Q8TAB5 229 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 ZNF641Q96N77 438 aaPredicted RBP17.27■□□□□ 0.36
PSEN1-217ENST00000556533 TSGA13Q96PP4 275 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 MYOCQ99972 504 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 ORAI3Q9BRQ5 295 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 TSGA10Q9BZW7 698 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 NOD2Q9HC29 1040 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 SEPT10Q9P0V9 454 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 DKK3Q9UBP4 350 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 GGT7Q9UJ14 662 aa17.27■□□□□ 0.36
PSEN1-217ENST00000556533 PLXND1Q9Y4D7 1925 aa17.27■□□□□ 0.35
PSEN1-217ENST00000556533 CCDC66A2RUB6 948 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 C4orf47A7E2U8 309 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 KCNK1O00180 336 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 WNT9AO14904 365 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 KRT86O43790 486 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 JCHAINP01591 159 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 PRKCGP05129 697 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 PTMAP06454 111 aaKnown RBP17.26■□□□□ 0.35
PSEN1-217ENST00000556533 CCDC175P0C221 793 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 RWDD2BP57060 319 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 RACK1P63244 317 aaKnown RBP17.26■□□□□ 0.35
PSEN1-217ENST00000556533 CCZ1BP86790 482 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 CCZ1P86791 482 aaPredicted RBP17.26■□□□□ 0.35
PSEN1-217ENST00000556533 SEMG2Q02383 582 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 TAZQ16635 292 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 SETMARQ53H47 684 aaPredicted RBP17.26■□□□□ 0.35
PSEN1-217ENST00000556533 FAM182AQ5T1J6 154 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 CCDC181Q5TID7 509 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 NEK5Q6P3R8 708 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 NT5DC3Q86UY8 548 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 TEX26Q8N6G2 289 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 NETO1Q8TDF5 533 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 PDCD6IPQ8WUM4 868 aaKnown RBP17.26■□□□□ 0.35
PSEN1-217ENST00000556533 RAB7BQ96AH8 199 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 HAUS1Q96CS2 278 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 NSMCE3Q96MG7 304 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 NUDCD1Q96RS6 583 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 WRAP53Q9BUR4 548 aaKnown RBP17.26■□□□□ 0.35
PSEN1-217ENST00000556533 TMEM9BQ9NQ34 198 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 LZTFL1Q9NQ48 299 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 PACSIN2Q9UNF0 486 aaPredicted RBP17.26■□□□□ 0.35
PSEN1-217ENST00000556533 ZFR2Q9UPR6 939 aaKnown RBP17.26■□□□□ 0.35
PSEN1-217ENST00000556533 PCDHGC4Q9Y5F7 938 aa17.26■□□□□ 0.35
PSEN1-217ENST00000556533 FAM186AA6NE01 2351 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 GVINP1Q7Z2Y8 2422 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 hCG_1818297A0A087WSY0 165 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.25■□□□□ 0.35
PSEN1-217ENST00000556533 IGLON5A6NGN9 336 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 LATO43561 262 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 TSPAN6O43657 245 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 AP1G1O43747 822 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 CTNNA2P26232 953 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 C21orf59P57076 290 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 RPS21P63220 83 aaKnown RBP17.25■□□□□ 0.35
PSEN1-217ENST00000556533 ADCY2Q08462 1091 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 GRIK2Q13002 908 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 SGCGQ13326 291 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 STAT4Q14765 748 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 ZNF284Q2VY69 593 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 RNF10Q8N5U6 811 aaKnown RBP17.25■□□□□ 0.35
PSEN1-217ENST00000556533 UBL4BQ8N7F7 174 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 HCAR2Q8TDS4 363 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 HDAC11Q96DB2 347 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 RMDN1Q96DB5 314 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 SEMA3CQ99985 751 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms