RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ICAM3P32942 547 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 CCL15Q16663 113 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 GJC2Q5T442 439 aaPredicted RBP15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 KLHDC10Q6PID8 442 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 BBS2Q9BXC9 721 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 CLPBQ9H078 707 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 PDZD7Q9H5P4 517 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 FAM149AA5PLN7 773 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 E7ESA3 106 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 LINC00032P0C843 101 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 MPP1Q00013 466 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 ILF2Q12905 390 aaKnown RBP15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 PPIL2Q13356 520 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 MBLAC2Q68D91 279 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 FSTL5Q8N475 847 aaPredicted RBP15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 VPS37AQ8NEZ2 397 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 VTA1Q9NP79 307 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 RFPL1O75677 317 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 GUCA1CO95843 209 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 OXCT1P55809 520 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 TBX4P57082 545 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 LRRC74AQ0VAA2 488 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 DPYSL2Q16555 572 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 PERM1Q5SV97 790 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 C9orf57Q5W0N0 161 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 OVOS1Q6IE37 1185 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 IL27RAQ6UWB1 636 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 AHI1Q8N157 1196 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 CBR4Q8N4T8 237 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 HOPXQ9BPY8 73 aaPredicted RBP15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 GBA3Q9H227 469 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 RIBC2Q9H4K1 309 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 TPRKBQ9Y3C4 175 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 COL14A1Q05707 1796 aaKnown RBP15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 RGS5O15539 181 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 CCNT2O60583 730 aaKnown RBP15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 MSH3P20585 1137 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 CYP2C18P33260 490 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 MBTD1Q05BQ5 628 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 SCIMPQ6UWF3 145 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 C2orf69Q8N8R5 385 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 SERPINB11Q96P15 392 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 GBA2Q9HCG7 927 aaPredicted RBP15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 CATSPERZQ9NTU4 200 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 VWA7Q9Y334 891 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 NMBRP28336 390 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 DGCR6Q14129 220 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 PSMD5Q16401 504 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 TTLL9Q3SXZ7 439 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 TMEM192Q8IY95 271 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 SETD9Q8NE22 299 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 PPP1R13LQ8WUF5 828 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 TRMOQ9BU70 441 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 CCDC106Q9BWC9 280 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 TMEM161AQ9NX61 479 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 CCDC88AQ3V6T2 1871 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 MYH11P35749 1972 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 PKD1L3Q7Z443 1732 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 BBIP1A8MTZ0 92 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 PCNAP12004 261 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 VGLL4Q14135 290 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 PLCL1Q15111 1095 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 CMPK2Q5EBM0 449 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 GNASQ5JWF2 1037 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 LPCAT1Q8NF37 534 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 BPIFB6Q8NFQ5 453 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 DPEP3Q9H4B8 488 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 PARVBQ9HBI1 364 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 KAT6AQ92794 2004 aa15.13■□□□□ 0.01
ARHGEF40-207ENST00000556399 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 CCDC189A1A4V9 331 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 OR1E1P30953 314 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 IFNA8P32881 189 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 ZNF177Q13360 481 aaPredicted RBP15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 RNF219Q5W0B1 726 aaPredicted RBP15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 SVOPQ8N4V2 548 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 CLEC4CQ8WTT0 213 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 ZMYM5Q9UJ78 669 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 ZNF112Q9UJU3 913 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 SPTLC1O15269 473 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 GRIN3BO60391 1043 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 POMCP01189 267 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 CCDC159P0C7I6 412 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 PTPN3P26045 913 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 AIF1P55008 147 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 EPS8Q12929 822 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 DDX39BQ13838 428 aaKnown RBP15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 ZNF460Q14592 562 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 TAS1R3Q7RTX0 852 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 TMEM86AQ8N2M4 240 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 PARK7Q99497 189 aaKnown RBP15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 OSBPL6Q9BZF3 934 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 C6orf62Q9GZU0 229 aaPredicted RBP15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 TJP1Q07157 1748 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 H6PDO95479 791 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 SLC11A2P49281 568 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 KRR1Q13601 381 aaKnown RBP15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 STXBP5Q5T5C0 1151 aa15.12■□□□□ 0.01
ARHGEF40-207ENST00000556399 GPSM1Q86YR5 675 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms