RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 SYCP2LQ5T4T6 812 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 ATG9BQ674R7 924 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 NCAPH2Q6IBW4 605 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 TANGO2Q6ICL3 276 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 SPSB3Q6PJ21 355 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 H1FNTQ75WM6 255 aaPredicted RBP5.34□□□□□ -1.55
PRPF39-209ENST00000556353 ARMC9Q7Z3E5 817 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 TRIM74Q86UV6 250 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 TRIM73Q86UV7 250 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 MYLK4Q86YV6 388 aaPredicted RBP5.34□□□□□ -1.55
PRPF39-209ENST00000556353 TMC8Q8IU68 726 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 TEX45Q8NA69 505 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 TMED6Q8WW62 240 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 KIF1BO60333 1816 aa5.34□□□□□ -1.55
PRPF39-209ENST00000556353 ANKRD30AQ9BXX3 1397 aa5.33□□□□□ -1.56
PRPF39-209ENST00000556353 A0A1B0GUV1 79 aa5.33□□□□□ -1.56
PRPF39-209ENST00000556353 SMTNL1A8MU46 457 aa5.33□□□□□ -1.56
PRPF39-209ENST00000556353 ITGB8P26012 769 aa5.33□□□□□ -1.56
PRPF39-209ENST00000556353 COASYQ13057 564 aa5.33□□□□□ -1.56
PRPF39-209ENST00000556353 HDAC1Q13547 482 aaPredicted RBP5.33□□□□□ -1.56
PRPF39-209ENST00000556353 BLMHQ13867 455 aa5.33□□□□□ -1.56
PRPF39-209ENST00000556353 C1orf228Q6PIY5 440 aa5.33□□□□□ -1.56
PRPF39-209ENST00000556353 SYT13Q7L8C5 426 aa5.33□□□□□ -1.56
PRPF39-209ENST00000556353 LHPPQ9H008 270 aa5.33□□□□□ -1.56
PRPF39-209ENST00000556353 TAF1DQ9H5J8 278 aaPredicted RBP5.33□□□□□ -1.56
PRPF39-209ENST00000556353 ZNF556Q9HAH1 456 aa5.33□□□□□ -1.56
PRPF39-209ENST00000556353 ADAMTS13Q76LX8 1427 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 PPLO60437 1756 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 IFT172Q9UG01 1749 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 SHPRHQ149N8 1683 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 IGHV4-28A0A0C4DH34 117 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 PLSCR5A0PG75 271 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 E7EVH7 732 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 LDB3O75112 727 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 SERPINI2O75830 405 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 CBX6O95503 412 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 IGKV3-20P01619 116 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 ARSAP15289 507 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 ZNF12P17014 697 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 YWHAQP27348 245 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 PNPLA4P41247 253 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 MCM2P49736 904 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 ERVFC1-1P60608 527 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 FOXO1Q12778 655 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 THOC5Q13769 683 aaKnown RBP5.32□□□□□ -1.56
PRPF39-209ENST00000556353 IDI1Q13907 227 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 SMAD1Q15797 465 aaKnown RBP5.32□□□□□ -1.56
PRPF39-209ENST00000556353 TBC1D9BQ66K14 1250 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.32□□□□□ -1.56
PRPF39-209ENST00000556353 RASGRP2Q7LDG7 609 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 CCDC146Q8IYE0 955 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 CACNA2D3Q8IZS8 1091 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 TCP11L2Q8N4U5 519 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 OR6Y1Q8NGX8 325 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 GOLGA1Q92805 767 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 TMEM18Q96B42 140 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 LTV1Q96GA3 475 aaPredicted RBP5.32□□□□□ -1.56
PRPF39-209ENST00000556353 SLITRK1Q96PX8 696 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 FIZ1Q96SL8 496 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 C1QTNF4Q9BXJ3 329 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 PLEKHA2Q9HB19 425 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 GRHL1Q9NZI5 618 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 NHSL1Q5SYE7 1610 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 DIP2AQ14689 1571 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 SETBP1Q9Y6X0 1596 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 NEXMIFQ5QGS0 1516 aa5.32□□□□□ -1.56
PRPF39-209ENST00000556353 TMEM94Q12767 1356 aa5.31□□□□□ -1.56
PRPF39-209ENST00000556353 A0A096LPK6 155 aa5.31□□□□□ -1.56
PRPF39-209ENST00000556353 TARSL2A2RTX5 802 aaKnown RBP5.31□□□□□ -1.56
PRPF39-209ENST00000556353 LINC01553A4QN01 128 aa5.31□□□□□ -1.56
PRPF39-209ENST00000556353 KRT38O76015 456 aa5.31□□□□□ -1.56
PRPF39-209ENST00000556353 ZNF432O94892 652 aa5.31□□□□□ -1.56
PRPF39-209ENST00000556353 CAMTA2O94983 1202 aa5.31□□□□□ -1.56
PRPF39-209ENST00000556353 METTL18O95568 372 aa5.31□□□□□ -1.56
PRPF39-209ENST00000556353 C21orf33P30042 268 aaPredicted RBP5.31□□□□□ -1.56
PRPF39-209ENST00000556353 RBM5P52756 815 aaKnown RBP eCLIP5.31□□□□□ -1.56
PRPF39-209ENST00000556353 TRAF3Q13114 568 aa5.31□□□□□ -1.56
PRPF39-209ENST00000556353 SLC39A14Q15043 492 aa5.31□□□□□ -1.56
PRPF39-209ENST00000556353 EFHC1Q5JVL4 640 aa5.31□□□□□ -1.56
PRPF39-209ENST00000556353 PATL1Q86TB9 770 aaKnown RBP5.31□□□□□ -1.56
PRPF39-209ENST00000556353 RBFAQ8N0V3 343 aa5.31□□□□□ -1.56
PRPF39-209ENST00000556353 GALNT15Q8N3T1 639 aa5.31□□□□□ -1.56
PRPF39-209ENST00000556353 DUX5Q96PT3 197 aa5.31□□□□□ -1.56
PRPF39-209ENST00000556353 SLC25A33Q9BSK2 321 aa5.31□□□□□ -1.56
PRPF39-209ENST00000556353 PLCB1Q9NQ66 1216 aa5.31□□□□□ -1.56
PRPF39-209ENST00000556353 G6PC2Q9NQR9 355 aa5.31□□□□□ -1.56
PRPF39-209ENST00000556353 OCIAD1Q9NX40 245 aa5.31□□□□□ -1.56
PRPF39-209ENST00000556353 FBXO40Q9UH90 709 aa5.31□□□□□ -1.56
PRPF39-209ENST00000556353 AGO1Q9UL18 857 aaKnown RBP5.31□□□□□ -1.56
PRPF39-209ENST00000556353 RIMS2Q9UQ26 1411 aa5.31□□□□□ -1.56
PRPF39-209ENST00000556353 LRP6O75581 1613 aa5.3□□□□□ -1.56
PRPF39-209ENST00000556353 AHDC1Q5TGY3 1603 aaPredicted RBP5.3□□□□□ -1.56
PRPF39-209ENST00000556353 TRPM2O94759 1503 aa5.3□□□□□ -1.56
PRPF39-209ENST00000556353 OR6C68A6NDL8 312 aa5.3□□□□□ -1.56
PRPF39-209ENST00000556353 C17orf100A8MU93 164 aa5.3□□□□□ -1.56
PRPF39-209ENST00000556353 KDM4EB2RXH2 506 aaPredicted RBP5.3□□□□□ -1.56
PRPF39-209ENST00000556353 F5H423 210 aaPredicted RBP5.3□□□□□ -1.56
PRPF39-209ENST00000556353 SLC16A5O15375 505 aa5.3□□□□□ -1.56
PRPF39-209ENST00000556353 CKMT1AP12532 417 aa5.3□□□□□ -1.56
PRPF39-209ENST00000556353 CST5P28325 142 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms