RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 EPB41L4BQ9H329 900 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 C10orf88Q9H8K7 445 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 USP29Q9HBJ7 922 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 ATP13A2Q9NQ11 1180 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 ARHGEF4Q9NR80 690 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 MARCH5Q9NX47 278 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 NINJ2Q9NZG7 142 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 CALCOCO1Q9P1Z2 691 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 SCML2Q9UQR0 700 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 PDZD2O15018 2839 aa6.97□□□□□ -1.29
SLIRP-204ENST00000555890 LAMA1P25391 3075 aa6.96□□□□□ -1.29
SLIRP-204ENST00000555890 GREB1Q4ZG55 1949 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 URB1O60287 2271 aaKnown RBP6.96□□□□□ -1.3
SLIRP-204ENST00000555890 C5orf60A6NFR6 353 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 E7EVH7 732 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 MTSS1O43312 755 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 NARSO43776 548 aaKnown RBP6.96□□□□□ -1.3
SLIRP-204ENST00000555890 TCEA3O75764 348 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 ACSL3O95573 720 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 AGTP01019 485 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 SHBGP04278 402 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 HAPLN1P10915 354 aaPredicted RBP6.96□□□□□ -1.3
SLIRP-204ENST00000555890 TSHRP16473 764 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 HOXB8P17481 243 aaPredicted RBP6.96□□□□□ -1.3
SLIRP-204ENST00000555890 NR1D1P20393 614 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 MX2P20592 715 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 CCR1P32246 355 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 SERPINB6P35237 376 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 FDFT1P37268 417 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 MASP1P48740 699 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 LMAN1P49257 510 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 TUFMP49411 452 aaKnown RBP6.96□□□□□ -1.3
SLIRP-204ENST00000555890 GPLD1P80108 840 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 SARNPP82979 210 aaKnown RBP6.96□□□□□ -1.3
SLIRP-204ENST00000555890 COG7P83436 770 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 UBE3AQ05086 875 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 PDIA2Q13087 525 aaKnown RBP6.96□□□□□ -1.3
SLIRP-204ENST00000555890 MTA1Q13330 715 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 DPYSQ14117 519 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 SIM2Q14190 667 aaPredicted RBP6.96□□□□□ -1.3
SLIRP-204ENST00000555890 PPP2R5DQ14738 602 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 PCSK7Q16549 785 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 SKIDA1Q1XH10 827 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 USP41Q3LFD5 358 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 EMC10Q5UCC4 262 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 NCBP2-AS2Q69YL0 99 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 KIAA1841Q6NSI8 718 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 KCNT2Q6UVM3 1135 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 RIPOR1Q6ZS17 1223 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 ARHGEF18Q6ZSZ5 1173 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 ZNF771Q7L3S4 317 aaPredicted RBP6.96□□□□□ -1.3
SLIRP-204ENST00000555890 TAOK1Q7L7X3 1001 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 SCD5Q86SK9 330 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 TAC4Q86UU9 113 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 VPS52Q8N1B4 723 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 RIBC1Q8N443 379 aaPredicted RBP6.96□□□□□ -1.3
SLIRP-204ENST00000555890 NAT8LQ8N9F0 302 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 CCNYQ8ND76 341 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 SCAMP5Q8TAC9 235 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 UHMK1Q8TAS1 419 aaKnown RBP6.96□□□□□ -1.3
SLIRP-204ENST00000555890 PIP4K2CQ8TBX8 421 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 PYROXD1Q8WU10 500 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 HTR3CQ8WXA8 447 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 CPT1BQ92523 772 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 ZNF669Q96BR6 464 aaPredicted RBP6.96□□□□□ -1.3
SLIRP-204ENST00000555890 SPATA17Q96L03 361 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 NECTIN4Q96NY8 510 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 SERPINB11Q96P15 392 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 PGLYRP2Q96PD5 576 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 HAPLN3Q96S86 360 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 SLC30A3Q99726 388 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 EMILIN2Q9BXX0 1053 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 CAPS2Q9BXY5 557 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 MUC3BQ9H195 1237 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 RASSF4Q9H2L5 321 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 CNOT10Q9H9A5 744 aaKnown RBP6.96□□□□□ -1.3
SLIRP-204ENST00000555890 PPCSQ9HAB8 311 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 WDR6Q9NNW5 1121 aaKnown RBP6.96□□□□□ -1.3
SLIRP-204ENST00000555890 TLR8Q9NR97 1041 aaKnown RBP6.96□□□□□ -1.3
SLIRP-204ENST00000555890 OLA1Q9NTK5 396 aaKnown RBP6.96□□□□□ -1.3
SLIRP-204ENST00000555890 ARHGEF38Q9NXL2 777 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 CLIC5Q9NZA1 410 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 IL37Q9NZH6 218 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 DTLQ9NZJ0 730 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 OR12D3Q9UGF7 316 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 SLC12A6Q9UHW9 1150 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 BACE2Q9Y5Z0 518 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 SPENQ96T58 3664 aaKnown RBP6.96□□□□□ -1.3
SLIRP-204ENST00000555890 DOCK8Q8NF50 2099 aa6.96□□□□□ -1.3
SLIRP-204ENST00000555890 CSMD1Q96PZ7 3565 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 NOTCH1P46531 2555 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 A0A0A0MRY4 1105 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 A0A1W2PQH9 124 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 MTMR11A4FU01 709 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 SHISA7A6NL88 538 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 SMIM23A6NLE4 172 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 NT5C1B-RDH14C9J2C7 533 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 GOLGA8MH3BSY2 632 aa6.95□□□□□ -1.3
SLIRP-204ENST00000555890 FGF10O15520 208 aaPredicted RBP6.95□□□□□ -1.3
SLIRP-204ENST00000555890 IRAK2O43187 625 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms