RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 KLHDC8BQ8IXV7 354 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 ZMIZ2Q8NF64 920 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 CEP70Q8NHQ1 597 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 SPATA22Q8NHS9 363 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 CALML6Q8TD86 181 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 DQX1Q8TE96 717 aaKnown RBP7.07□□□□□ -1.28
TDP1-213ENST00000555880 MYLPFQ96A32 169 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 TSPAN17Q96FV3 270 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 DCUN1D1Q96GG9 259 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 GCNAQ96QF7 691 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 HAPLN3Q96S86 360 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 GAD1Q99259 594 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 SPATA16Q9BXB7 569 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 PIDD1Q9HB75 910 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 CSNK1G1Q9HCP0 422 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 FAM105AQ9NUU6 356 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 TBC1D13Q9NVG8 400 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 ARHGEF38Q9NXL2 777 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 CLIC5Q9NZA1 410 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 ZDHHC2Q9UIJ5 367 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 DSEQ9UL01 958 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 RAB26Q9ULW5 256 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 C15orf38-AP3S2A0A0A6YYH1 394 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 SMIM31A0A1B0GVY4 71 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 EME2A4GXA9 379 aaPredicted RBP7.07□□□□□ -1.28
TDP1-213ENST00000555880 CAPN8A6NHC0 703 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 MANSC4A6NHS7 340 aaPredicted RBP7.07□□□□□ -1.28
TDP1-213ENST00000555880 HHLA1C9JL84 531 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 CACNG3O60359 315 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 PMPCBO75439 489 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 MT-CYBP00156 380 aaPredicted RBP7.07□□□□□ -1.28
TDP1-213ENST00000555880 AMHP03971 560 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 SBK3P0C264 359 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 PIM1P11309 404 aaPredicted RBP7.07□□□□□ -1.28
TDP1-213ENST00000555880 CPB1P15086 417 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 BDNFP23560 247 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 ATP5F1P24539 256 aaPredicted RBP7.07□□□□□ -1.28
TDP1-213ENST00000555880 CCR1P32246 355 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 SLC19A1P41440 591 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 SLC1A2P43004 574 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 CCR10P46092 362 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 CLCN2P51788 898 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 PKNOX1P55347 436 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 DNAJB13P59910 316 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 STX5Q13190 355 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 ITGA7Q13683 1181 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 ADGRE1Q14246 886 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 PTK2BQ14289 1009 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 ZNF423Q2M1K9 1284 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 CNPY1Q3B7I2 92 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 AGAP9Q5VTM2 703 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 BTBD8Q5XKL5 378 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 OLFML2BQ68BL8 750 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 KIAA0930Q6ICG6 404 aaPredicted RBP7.07□□□□□ -1.28
TDP1-213ENST00000555880 BEND5Q7L4P6 421 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 ARPINQ7Z6K5 226 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 LRRC49Q8IUZ0 686 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 DENND6AQ8IWF6 608 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 SCML4Q8N228 414 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 TMEM151AQ8N4L1 468 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 C2CD4AQ8NCU7 369 aaPredicted RBP7.07□□□□□ -1.28
TDP1-213ENST00000555880 BHLHE22Q8NFJ8 381 aaPredicted RBP7.07□□□□□ -1.28
TDP1-213ENST00000555880 ADCY4Q8NFM4 1077 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 NXNL1Q96CM4 212 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 TMA16Q96EY4 203 aaKnown RBP7.07□□□□□ -1.28
TDP1-213ENST00000555880 IL12RB2Q99665 862 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 RHOBTB2Q9BYZ6 727 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 POMKQ9H5K3 350 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 ZNF385DQ9H6B1 395 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 CHST12Q9NRB3 414 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 ABCC13Q9NSE7 274 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 UTP6Q9NYH9 597 aaKnown RBP7.07□□□□□ -1.28
TDP1-213ENST00000555880 HACD3Q9P035 362 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 IPO11Q9UI26 975 aaKnown RBP7.07□□□□□ -1.28
TDP1-213ENST00000555880 COPG1Q9Y678 874 aaKnown RBP7.07□□□□□ -1.28
TDP1-213ENST00000555880 SLC4A7Q9Y6M7 1214 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 COMMD3-BMI1R4GMX3 469 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 MYLKQ15746 1914 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 ARHGEF37A1IGU5 675 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 HEATR9A2RTY3 570 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 ARL5CA6NH57 179 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 CASTOR2A6NHX0 329 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 TARM1B6A8C7 271 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 DENRO43583 198 aaKnown RBP7.06□□□□□ -1.28
TDP1-213ENST00000555880 PAGE1O75459 146 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 BCAS2O75934 225 aaPredicted RBP7.06□□□□□ -1.28
TDP1-213ENST00000555880 STAMBPO95630 424 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 PGK1P00558 417 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 RBP1P09455 135 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 PABPC4LP0CB38 370 aaKnown RBP7.06□□□□□ -1.28
TDP1-213ENST00000555880 XRCC1P18887 633 aaPredicted RBP7.06□□□□□ -1.28
TDP1-213ENST00000555880 GABRB3P28472 473 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 ARCN1P48444 511 aaKnown RBP7.06□□□□□ -1.28
TDP1-213ENST00000555880 BEX3Q00994 111 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 TSPY1Q01534 308 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 NSUN2Q08J23 767 aaKnown RBP eCLIP7.06□□□□□ -1.28
TDP1-213ENST00000555880 MAP2K5Q13163 448 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 MAP7Q14244 749 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 ZNF460Q14592 562 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 PSMD5Q16401 504 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms