RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 CHERPQ8IWX8 916 aaKnown RBP10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 TTLL6Q8N841 843 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 AGR3Q8TD06 166 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 FOXJ1Q92949 421 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 ELMO3Q96BJ8 720 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 TAMM41Q96BW9 452 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 SGF29Q96ES7 293 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 VCPIP1Q96JH7 1222 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 SLC2A13Q96QE2 648 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 PHOX2BQ99453 314 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 VPS45Q9NRW7 570 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 KIF17Q9P2E2 1029 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 PLLPQ9Y342 182 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 ZNF175Q9Y473 711 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 CORINQ9Y5Q5 1042 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 FER1L6Q2WGJ9 1857 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 A0A0B4J269 797 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 ARHGEF35A5YM69 484 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 TRIM49D1C9J1S8 452 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 H3BNH8 94 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 SYNCRIPO60506 623 aaKnown RBP10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 MICAL2O94851 1124 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 ESRRBO95718 433 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 HOXA6P31267 233 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 TTKP33981 857 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 NUDT1P36639 197 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 SLC26A2P50443 739 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 ST13P50502 369 aaKnown RBP10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 SCRN3Q0VDG4 424 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 STX3Q13277 289 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 TUBB3Q13509 450 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 HERC3Q15034 1050 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 PPA1Q15181 289 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 SMTNL2Q2TAL5 461 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 FGD3Q5JSP0 725 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 MFSD14BQ5SR56 506 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 ZBTB41Q5SVQ8 909 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 UBE2UQ5VVX9 321 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 STX12Q86Y82 276 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 SCUBE3Q8IX30 993 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 RHOT1Q8IXI2 618 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 OR7D4Q8NG98 312 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 TRIM43Q96BQ3 446 aaPredicted RBP10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 CMTM5Q96DZ9 223 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 RMND5BQ96G75 393 aaPredicted RBP10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 KREMEN1Q96MU8 473 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 MRIQ9BWK5 157 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 HIPK3Q9H422 1215 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 PCIF1Q9H4Z3 704 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 RIOX1Q9H6W3 641 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 C10orf88Q9H8K7 445 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 ACTR3BQ9P1U1 418 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 SIRPGQ9P1W8 387 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 DTX4Q9Y2E6 619 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 HCN4Q9Y3Q4 1203 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 NFASCO94856 1347 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 SCN9AQ15858 1988 aa10.45□□□□□ -0.74
EFCAB11-208ENST00000555872 C7orf72A4D263 438 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 LYPLA1O75608 230 aaPredicted RBP10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 CD4P01730 458 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 EPHA3P29320 983 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 GPD2P43304 727 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 ERVK-21P61565 698 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 GALK2Q01415 458 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 FLOT2Q14254 428 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 ERV3-1Q14264 604 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 TRIM16LQ309B1 348 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 TPGS2Q68CL5 300 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 LYPD8Q6UX82 237 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 FIBCD1Q8N539 461 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 ATAD1Q8NBU5 361 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 GANCQ8TET4 914 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 CPA5Q8WXQ8 436 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 SHC3Q92529 594 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 NGRNQ9NPE2 291 aaKnown RBP10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 POLE3Q9NRF9 147 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 SAGE1Q9NXZ1 904 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 GINS2Q9Y248 185 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 ARFGEF1Q9Y6D6 1849 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 PLOD2O00469 737 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 NOP56O00567 594 aaKnown RBP10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 USP2O75604 605 aaPredicted RBP10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 TOM1L1O75674 476 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 INHBBP09529 407 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 PTPN1P18031 435 aaKnown RBP10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 ACAT1P24752 427 aaKnown RBP10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 DMC1Q14565 340 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 MAPKAPK3Q16644 382 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 SUPT20HL1Q3ZLR7 823 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 FAM182AQ5T1J6 154 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 SETD3Q86TU7 594 aaPredicted RBP10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 CTAGE3PQ8IX95 158 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 PHTF2Q8N3S3 785 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 ZNF527Q8NB42 609 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 AKAP1Q92667 903 aaKnown RBP eCLIP10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 KIF12Q96FN5 646 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 RPRD1AQ96P16 312 aaPredicted RBP10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 DEPDC7Q96QD5 511 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 FERMT1Q9BQL6 677 aa10.44□□□□□ -0.74
EFCAB11-208ENST00000555872 TMEM79Q9BSE2 394 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms